Gene Shewana3_1448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1448 
Symbol 
ID4479665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1679600 
End bp1680352 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content49% 
IMG OID639726018 
Producthypothetical protein 
Protein accessionYP_869088 
Protein GI117919896 
COG category[S] Function unknown 
COG ID[COG2859] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000347149 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000712925 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGTAGCGA AAGGCATCCC ATCGAGAGAA TCAGTTATGC AAAAGAGTTA CCTACTCCCC 
GCCCTCGTGC TTGGCGGTTT TTTATGTGCG GGCATGGTCT ATGTAGGACA AAGCGCTAGC
TCGGCGCTGT TAGAGATGAA AGCCCTAGAG CGCACAGTCA CAGTTAAAGG GCTGGCCGAA
AAGGAAGTGA AAGCCAATAT CGCCATCTGG CCGATTAACT TCACCGAAGT CGACAATAAC
CTGCCTAAGC TCTACGACAC AGTGCAGCAA AAAACCGACA GAGTGGTCGC CTTCCTCAAG
GAACAGGGTT TTAGCGACAG CGAGATTACC GTATCGCTGC CGACGATAGA AGACAGGCAG
GCCCAAGGCT ACGTCGACCC GAACGTGAGG TATCGTTACT CGGCTAAGGT GAATCTTTCT
GTCTATACCC CACAGATTGA TTTAATGCTA AGCACGCGTA AGCAAATGAT AAATTTGGTT
AAAGAAGGCA TTGCCATCGG TAGCCAAGAT TATGAAAACC GCACCGAGTT TTTATTTACG
GCGCTCAATG ATGTGAAACC GACCATGGTG CAGGAAGCGA CGCAAAATGC GCGGGAAGTG
GCCGAAAAGT TTGCCAAGGA CTCACAATCG CGTTTGGGTA AGATTAAGAG TGCCAGCCAA
GGCCAGTTTA CGATTTCCGA TCGTGACAGC AGCACGCCTT ACATAAAACA AATTCGCATT
GTGTCTACGC TGACCTATTA TTTAAACGAC TGA
 
Protein sequence
MVAKGIPSRE SVMQKSYLLP ALVLGGFLCA GMVYVGQSAS SALLEMKALE RTVTVKGLAE 
KEVKANIAIW PINFTEVDNN LPKLYDTVQQ KTDRVVAFLK EQGFSDSEIT VSLPTIEDRQ
AQGYVDPNVR YRYSAKVNLS VYTPQIDLML STRKQMINLV KEGIAIGSQD YENRTEFLFT
ALNDVKPTMV QEATQNAREV AEKFAKDSQS RLGKIKSASQ GQFTISDRDS STPYIKQIRI
VSTLTYYLND