| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1423 |
|---|
| Symbol | |
|---|
| ID | 4479640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 1653091 |
|---|
| End bp | 1653561 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639725993 |
|---|
| Product | Dual specificity protein phosphatase |
|---|
| Protein accession | YP_869063 |
|---|
| Protein GI | 117919871 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.11885 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCATC TATTTTGGTT AGTTGAAGGC AAGATCGCGG GTCGAAGTGG CCCCAACAAG
GACCCTTGGG ATTTAGCCGA GCTTAAGTCT TTGGGGATCC GTGCGGTGTT ATCTGTGAAT
GGCGGTGAGG GCTGTGAGCC TGGCAGTTTT AAGCACCACG GACTGCGTTA TGAATGCATT
CCTTTTTCCC GCAATGTCCC GCCGCAGGAA GGGGATGTTG CTATATGTGT TGCTCAGTTA
CCGCGGGCGC TGGCCTTTAT TCAGCAGTGT GAAGCCGATA ACTTGCCCGT GCTAATCCAT
TGCCGATCGG GTAAAGACCG TACAGGGCTT ATTATGGCCT ATTACTTGAT GGTGAATGGC
GCCGCGCCTT TGCATGCCGT TAGCCAAGTG CGCAGCATTC GCGACATTGC GTTTACTGCC
GAAGGTTGGG ATCAGTTTGC CTTCGATGTG CTCTATGCGT TACAGGAATA A
|
|---|
| Protein sequence | MQHLFWLVEG KIAGRSGPNK DPWDLAELKS LGIRAVLSVN GGEGCEPGSF KHHGLRYECI
PFSRNVPPQE GDVAICVAQL PRALAFIQQC EADNLPVLIH CRSGKDRTGL IMAYYLMVNG
AAPLHAVSQV RSIRDIAFTA EGWDQFAFDV LYALQE
|
|---|
| |