Gene Shewana3_1305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1305 
Symbol 
ID4479879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1520128 
End bp1520940 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content45% 
IMG OID639725859 
Producthypothetical protein 
Protein accessionYP_868945 
Protein GI117919753 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.96448 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGT ATATTGAACA TTTCCTGAAT CATGGTTACG TCTTATTACC CAATATACTT 
ACAGCGGAGG AATGCAAGCA TTTCAGGGCA CTGCTTGAAG CAAATTATCA AAAATATGCT
CCTCAGTATG CCAATGCTTC CTCTACAGCG GGTACGCTTT CAGATAAATC CACAGAAAAA
GTGGTATTTA ATCTCCACAA TAAATCCATG GACTGGTTCA GACTGTTTGA GCATCCCGAT
GTATTGGCAC TGCTGGATGT GGTACTTAAA CAAGGCTCAT ATAACAATAA TGAACCCTAT
TACCTGAACA ATATATCTGC ACGTTGTCCA TTGAAAGGCA ATCCAGGGCA GCAGTTGCAT
GTCGACAGCG CTTTACCCGG AGTGAATTAC TGCTTAAAAG CCAATGCAGT CTGGTTACTG
GATGATTTTA CACCCTCCAA TGGCGCAACA CGCTTGGTAC CAGGCAGCCA CACATGGACC
GAATTCCCTG AGAATGGCAA ACAACATCCC AATGAAATAT TGATCACGGG CCAACAAGGT
GGAGTGCTGA TCTTTAACGC CAATATGTGG CATGGGGGAG GAGCAAATAT GACAGATGTC
AGCCGCTGGG CACTGCTGCT AGGATACGCA AGATGGTTTA TCAAACCGTC ATTCGACTTT
ATGCAAAATA CTCCCGAGCA TATCTACAAT CGAATGAGTG ACGCCCAAAG ACGATTGCTG
GGTTTTCATT TAGTGCCCCC AAAAGATGAA TTCACGCGCC TGCGGCGAAT AGGCAACACG
CCAGAATGGC CAGCGCCTTA TGAATTGTCC TAG
 
Protein sequence
MKAYIEHFLN HGYVLLPNIL TAEECKHFRA LLEANYQKYA PQYANASSTA GTLSDKSTEK 
VVFNLHNKSM DWFRLFEHPD VLALLDVVLK QGSYNNNEPY YLNNISARCP LKGNPGQQLH
VDSALPGVNY CLKANAVWLL DDFTPSNGAT RLVPGSHTWT EFPENGKQHP NEILITGQQG
GVLIFNANMW HGGGANMTDV SRWALLLGYA RWFIKPSFDF MQNTPEHIYN RMSDAQRRLL
GFHLVPPKDE FTRLRRIGNT PEWPAPYELS