Gene Shewana3_0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0920 
Symbol 
ID4477465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1075884 
End bp1076435 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content48% 
IMG OID639725453 
ProductFMN-binding domain-containing protein 
Protein accessionYP_868561 
Protein GI117919369 
COG category[C] Energy production and conversion 
COG ID[COG4659] Predicted NADH:ubiquinone oxidoreductase, subunit RnfG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0051552 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCATA CATATCTGAA TAGCTTGTGG TTTATGCCAA TGGTCGTCGT GGCCGCCCCT 
GCATTTTCTG CGGATTATTT AACAGTGGCC CAAGCGCAGG CGTTGATTTT TGATAAGGCA
GCGGTATTTA GTGAGCGTCC AACCTTACTG AGCTCCGATG CGAAAGATCA GATCAAAGAT
TTATCGGGCG TTCGCCAACG CCAAGATCAG CAGCCTATCT GGAAAGTTGA AAAGGACGGT
CAGTTTCTCG GTTGGTTTGT GGTGGATGAT GTTGTCGGTA AACATGAGTA TATTACCTAC
GCTATCGGCA TCAGTCCGCA GGGCGAAGTG CTCGGGTTAG AGGTGCTCAG TTATCGTGAA
ACCCACGGTG GCCAAGTGCG TGAAGCGAGT TGGCGCGATC AATTCCACGG TAAAACCCTC
AAAGATCCCT TTAAACTCGA TGAGGATGTC AGCAATATTA GCGGTGCCAC ATTAAGTTGC
CGTAATTTAC TCGATGGCGT AAAACGGTTA CTTGTTATCC ATCAACTCTT TTTGTCGCAG
TCAGTCGCAT AG
 
Protein sequence
MAHTYLNSLW FMPMVVVAAP AFSADYLTVA QAQALIFDKA AVFSERPTLL SSDAKDQIKD 
LSGVRQRQDQ QPIWKVEKDG QFLGWFVVDD VVGKHEYITY AIGISPQGEV LGLEVLSYRE
THGGQVREAS WRDQFHGKTL KDPFKLDEDV SNISGATLSC RNLLDGVKRL LVIHQLFLSQ
SVA