Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0840 |
Symbol | |
ID | 4477051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 972865 |
End bp | 973701 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639725376 |
Product | hypothetical protein |
Protein accession | YP_868484 |
Protein GI | 117919292 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.332372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAGCA AAGGTAATGG TGTCACTTTT ATCAGTGCCT CCACCTCCAT TGAGGGCGAG ATGCAACTGG TGGGCACGGC ATTAGTTGCG GGGAAATTAG CGGGGAATAT CCGCTGCGCC GGACAGATTA AAATCGAGCT TGGTGGTGAA GTCTCGGGTG AGCTCAGCTG TGATGAACTG AAAGTCTGCG GAGTTTTTCG CGGCAAGGTG CGTTGTAATA AATTAGTGAT TGTCAGCTCT GGCACGGTCG AGGGCGAAGT GCTTAGCCAC CAATTAGAAA TTTATGAGGG CGGGCAATTT ATCGGTCAGC GCATTATCGG CCAAGAGTTG GAACATTTAC CCGAGCTATT ACAAACCTTA GCGCCAGAGG GCGCAGCTAA AAATACCAAC ACCGCTCAGA CTAACGCCTT GTATGCTCGG GATAATCAGC CGGGTGCGCG CAAATGGTTG CCCTATGGCG CCGCCGCCGT TATTGTGCTG GTCAGTGTCA TAACACCAGC AAAGTTAACT ACTTGGCTAA GCACCCTTGG TCAACCAGCG GCCATTACAG CAAATACTGC GCAGGGCGAT GCCCTGAATA GTGAAACTCT GCTGCAATCC CCCGTGAAAG ATGACTCGCT CGCCAAGGAT GGCGCTGTAG CAAGCGATAA CGACACGCAA ACGGCTTCAG CCATGGCATT GGATAGCCAC GATGGCAGCA ATCCAGAACA CCCAAGCGAA GGGCATCCTA ATATGGAGTC TGGCGCCGCA ATGGAAGACT TAGCGCAAAT GGAGCAAGGC CATGCCCAGA TGTTACAACA GGGCACGGCG AGCGATGTAC CTAGCGGTAA ACTCTAA
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Protein sequence | MGSKGNGVTF ISASTSIEGE MQLVGTALVA GKLAGNIRCA GQIKIELGGE VSGELSCDEL KVCGVFRGKV RCNKLVIVSS GTVEGEVLSH QLEIYEGGQF IGQRIIGQEL EHLPELLQTL APEGAAKNTN TAQTNALYAR DNQPGARKWL PYGAAAVIVL VSVITPAKLT TWLSTLGQPA AITANTAQGD ALNSETLLQS PVKDDSLAKD GAVASDNDTQ TASAMALDSH DGSNPEHPSE GHPNMESGAA MEDLAQMEQG HAQMLQQGTA SDVPSGKL
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