Gene Shewana3_0492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0492 
Symbol 
ID4476721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp575461 
End bp576135 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content54% 
IMG OID639725026 
Productformate-dependent nitrite reductase, NrfG protein 
Protein accessionYP_868139 
Protein GI117918947 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4235] Cytochrome c biogenesis factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGTT TAGGATTCAC CATTGCACTG CTGTTAAGCG GATTTGTGGC TTGGATTTTC 
TGGCAGCACG CGCGTTTAAA CCAGCGGCAA ACGTTGGTGG GAGAGTCTCA AGTCTCCCAT
GGCGTGCCTG TGCTGTGCAG TGTGCTTCTG CTATTGCTCA CGCTCGCCAT CTATAGCCAA
ACGGGGCGTT ATCAGGATTG GGATACAGGC AAGCTCGATG AAAACATTGA CTATTTAGTG
GCTGCCGACA TCACCAAAGC CCTGCGCCTC GTGGATGAAC AACCGCAAAA CCCGTTGGCA
TTACAGGCGC TTGCCGAGGC TTACAGCGCG GGTGGCTTAT ATGCCGATGC GGTGCTGACC
CTAGACCAAC TGCTCGCATT GGTGGGGGAG GATGCTGAGG TGCTCGGCGC TAAGGCAAAT
GCCCTCTATT ACCGCGATGG TCGGCAAATG ACCGCAGAGA CCCAAGCACT GATTGCACAG
ATCTTGGCGC TTGCGCCCTT TGAGCCGCAG ACGCGGATGC TACAGGCCAA CGACGCCTAT
CTTCATGGGC GCTACCAAGA GGCGATAGAC CATTGGCAAG CATTACTGGC GCAGCCAAGG
GCAGAAATTA ATCGTGAGGC CCTGTTAAAC GCCATCGGCA AGGCCCAAAG CAAATTGAAT
GAAAGTGGAT ATTAA
 
Protein sequence
MASLGFTIAL LLSGFVAWIF WQHARLNQRQ TLVGESQVSH GVPVLCSVLL LLLTLAIYSQ 
TGRYQDWDTG KLDENIDYLV AADITKALRL VDEQPQNPLA LQALAEAYSA GGLYADAVLT
LDQLLALVGE DAEVLGAKAN ALYYRDGRQM TAETQALIAQ ILALAPFEPQ TRMLQANDAY
LHGRYQEAID HWQALLAQPR AEINREALLN AIGKAQSKLN ESGY