Gene Shewana3_0451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0451 
Symbol 
ID4476680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp526350 
End bp527750 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content50% 
IMG OID639724986 
Productanion transporter 
Protein accessionYP_868099 
Protein GI117918907 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID[TIGR00785] anion transporter 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.865628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTAG AGCAATCAAA GTCTGTTCCC CCCAATCATT CGTCCGCGAA TGTCGGGCTT 
GAAAAGAAAA AAATGCTGAT CTTAGTCGCG GATATTTTTC TGCTATTCGC GCTATATTAC
GGTTTACCCT TTGACCAAGG GGTCAATACG GGTTTGGCTA TCTTAGTGTT CGCCGCCATC
TTGTGGTTAA CCGAAGCGAT TCACATCAGT ATCACGGCGA TTTTAGTGCC TATTTTGGCG
GTATTCTTTG GGGTGTTTGA AACCAAAGAA GCCATGAGTA ACTTTGCCAA TCCGATTATC
TATTTGTTTT TCGGTGGCTT TGTACTTGCG GCGGCGCTGC ACCATCAAAA GATCGATACT
TTGATCGCGC AAAAACTCCT GCTGGCCTCC AAAGGTAAAC TCAGCATTGC CTGTTTAATG
CTATTTGGGG TAACGGCGCT GTTGTCTATG TGGATCAGTA ACACTGCCAC CACGGCGATG
ATGTTGCCAC TCGCGCTGGG GATTTTGCAG CAGCTGGATC GTAAGCTGTA CCACAGCACT
TATGTGTTCC TGTTATTGGG GATTGCCTAT TCCGCGAACA TCGGCGGCAT TGGTACCTTA
GTCGGCAGCC CGCCAAACGC GATTGCGGCG GCACAGGTGG GGCTGAGCTT TAGCGATTGG
CTGAAGTTTG GGATCCCAAC CGTGATCTTG ATGTTGCCTA TGATGCTGCT GGCGCTTTAT
TGGTACTTTA AGCCGGATTT ATCGGCTAAG TGCGAGTTGG CGGTTGAAGA TCAAAAACTG
ACCTTCCAAG GCAAACTGAC CTTAGTTATC TTCCTCGCAA CCGTTTGTTG CTGGATTTTC
AGTGTGCCAC TGGCCAAAGC GCTCGGCGGA ATTACGCAAT TTGATACCGT TGTTGCACTC
GGTGCGGTCG TGCTGCTGGC GGGTTTAGGA CTGGTGGGTT GGAAGAAGAT TGAATCGACT
ACAGATTGGG GCGTGTTGAT CCTCTTCGGT GGCGGTTTGA CCTTAAGTGC TGTGCTCAAA
AGCACTGGTA CCAGCGTGTT CCTCGCACAC TGGATGACGG ATATTTTTGG CAGCACCCAT
ATGTCGCTGT TCGTGTTTGC GGTGATCGCT TTCGTGGTGA TGCTGACCGA GTTTGCCAGT
AATACCGCGA GCGCGGCGCT GTTAGTGCCA GTATTTGCGG CGATTGCCGA AGCATTAGGG
GTATCGCCTG TGATGCTATC CGTGCTGATT GGTATTGCGG CTTCCTGCGC CTTTATGTTG
CCAGTGGCGA CGCCGCCTAA TGCCATTGTT TATGGCTCTG GCCATATCAA GCAGTCGGAA
ATGGTGCGAG TGGGCATGAT AATTAACTTC CTCAGCATGA TAGTACTGGG CATTATTGCC
CACACCTTCT GGGAAGTGTA A
 
Protein sequence
MSLEQSKSVP PNHSSANVGL EKKKMLILVA DIFLLFALYY GLPFDQGVNT GLAILVFAAI 
LWLTEAIHIS ITAILVPILA VFFGVFETKE AMSNFANPII YLFFGGFVLA AALHHQKIDT
LIAQKLLLAS KGKLSIACLM LFGVTALLSM WISNTATTAM MLPLALGILQ QLDRKLYHST
YVFLLLGIAY SANIGGIGTL VGSPPNAIAA AQVGLSFSDW LKFGIPTVIL MLPMMLLALY
WYFKPDLSAK CELAVEDQKL TFQGKLTLVI FLATVCCWIF SVPLAKALGG ITQFDTVVAL
GAVVLLAGLG LVGWKKIEST TDWGVLILFG GGLTLSAVLK STGTSVFLAH WMTDIFGSTH
MSLFVFAVIA FVVMLTEFAS NTASAALLVP VFAAIAEALG VSPVMLSVLI GIAASCAFML
PVATPPNAIV YGSGHIKQSE MVRVGMIINF LSMIVLGIIA HTFWEV