Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0113 |
Symbol | |
ID | 4477262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 129604 |
End bp | 130224 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639724633 |
Product | hypothetical protein |
Protein accession | YP_867763 |
Protein GI | 117918571 |
COG category | [S] Function unknown |
COG ID | [COG4461] Uncharacterized protein conserved in bacteria, putative lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.357607 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTTA CCAAGAGAAT CAATATGCAA ACCGCAGGAG CGGCCGGGCT TTTAGCTGTG GCCTTAAGTG TCCCAGCTAT GGCCGCAGAA AAGCCTTCCT TTGACTGTGG CAAGGTTCAG GCAGGCAGTA TCGAAGAGCT GGTGTGTCAG GATGCGGGTT TGACTAAGCT CGATCAGCAA CTCGCCGAGG TATACGCGCA AGCTGCTGAT AAGGCAAAGA ATGAGCAACC TCCTATGCTA AAAGCCATGC AGCGGGGCTG GGTCAAAGGC CGTAATGAAT GTTGGAAGAG CGAAGATAAA CGCGCCTGTG TCGAGTCGAG TTACCAGACG CGGATTGCCG AGCTACAGGC GCAGTATCGT CTCGTGGAAA TGACTGGGCC GATATTTTAC GTCTGCGACG GTAATCCGGC GAATGAAGTC GTGGTCAGTT ACTTTAAGAC TGAGCCTGCC ACTCTGATAG CCGAGCGTGG CGATCAAACG TCCTTGATGT TTGTTCAGCC CAGTGGCAGC GGCGCTAAGT ATCAAGGCCG AAATGAGAGT CTGTGGGAAC ACCATGGCGA AGCCAAAATT GTCTGGGGAT ACGAAGCGCC AGAAATGACC TGCGTGGTAA AACCCCAGTA A
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Protein sequence | MTFTKRINMQ TAGAAGLLAV ALSVPAMAAE KPSFDCGKVQ AGSIEELVCQ DAGLTKLDQQ LAEVYAQAAD KAKNEQPPML KAMQRGWVKG RNECWKSEDK RACVESSYQT RIAELQAQYR LVEMTGPIFY VCDGNPANEV VVSYFKTEPA TLIAERGDQT SLMFVQPSGS GAKYQGRNES LWEHHGEAKI VWGYEAPEMT CVVKPQ
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