Gene Shewana3_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0113 
Symbol 
ID4477262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp129604 
End bp130224 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content53% 
IMG OID639724633 
Producthypothetical protein 
Protein accessionYP_867763 
Protein GI117918571 
COG category[S] Function unknown 
COG ID[COG4461] Uncharacterized protein conserved in bacteria, putative lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.357607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTTA CCAAGAGAAT CAATATGCAA ACCGCAGGAG CGGCCGGGCT TTTAGCTGTG 
GCCTTAAGTG TCCCAGCTAT GGCCGCAGAA AAGCCTTCCT TTGACTGTGG CAAGGTTCAG
GCAGGCAGTA TCGAAGAGCT GGTGTGTCAG GATGCGGGTT TGACTAAGCT CGATCAGCAA
CTCGCCGAGG TATACGCGCA AGCTGCTGAT AAGGCAAAGA ATGAGCAACC TCCTATGCTA
AAAGCCATGC AGCGGGGCTG GGTCAAAGGC CGTAATGAAT GTTGGAAGAG CGAAGATAAA
CGCGCCTGTG TCGAGTCGAG TTACCAGACG CGGATTGCCG AGCTACAGGC GCAGTATCGT
CTCGTGGAAA TGACTGGGCC GATATTTTAC GTCTGCGACG GTAATCCGGC GAATGAAGTC
GTGGTCAGTT ACTTTAAGAC TGAGCCTGCC ACTCTGATAG CCGAGCGTGG CGATCAAACG
TCCTTGATGT TTGTTCAGCC CAGTGGCAGC GGCGCTAAGT ATCAAGGCCG AAATGAGAGT
CTGTGGGAAC ACCATGGCGA AGCCAAAATT GTCTGGGGAT ACGAAGCGCC AGAAATGACC
TGCGTGGTAA AACCCCAGTA A
 
Protein sequence
MTFTKRINMQ TAGAAGLLAV ALSVPAMAAE KPSFDCGKVQ AGSIEELVCQ DAGLTKLDQQ 
LAEVYAQAAD KAKNEQPPML KAMQRGWVKG RNECWKSEDK RACVESSYQT RIAELQAQYR
LVEMTGPIFY VCDGNPANEV VVSYFKTEPA TLIAERGDQT SLMFVQPSGS GAKYQGRNES
LWEHHGEAKI VWGYEAPEMT CVVKPQ