Gene Shew_R0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_R0118 
Symbol 
ID4923720 
TyperRNA 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4122843 
End bp4124399 
Gene Length1557 bp 
Protein Length 
Translation table 
GC content53% 
IMG OID640724488 
Product16S ribosomal RNA 
Protein accession 
Protein GI 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00013046 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000312087 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTAATTGAAG AGTTTGATCA TGGCTCAGAT TGAACGCTGG CGGCAGGCCT AACACATGCA 
AGTCGAGCGG TAACATTTCA AAAGCTTGCT TTTGAAGATG ACGAGCGGCG GACGGGTGAG
TAATGCCTAG GGAACTGCCC AGTCGAGGGG GATAACAGTT GGAAACGACT GCTAATACCG
CATACGCCCT ACGGGGGAAA AGAGGGGATC TTCGGACCTT CTGCGATTGG ATGTACCTAG
GTGGGATTAG CTAGTAGGTG AGGTAATGGC TCACCTAGGC GACGATCCCT AGCTGTTCTG
AGAGGATGAT CAGCCACACT GGGACTGAGA CACGGCCCAG ACTCCTACGG GAGGCAGCAG
TGGGGAATAT TGCACAATGG GCGCAAGCCT GATGCAGCCA TGCCGCGTGT GTGAAGAAGG
CCTTCGGGTT GTAAAGCACT TTCAGCGAGG AGGAAAGGTT AACGGTTAAT ACCCGTTAGC
TGTGACGTTA CTCGCAGAAG AAGCACCGGC TAACTTCGTG CCAGCAGCCG CGGTAATACG
AGGGGTGCAA GCGTTAATCG GAATTACTGG GCGTAAAGCG TACGCAGGCG GTTGATTAAG
CGAGATGTGA AAGCCCCGGG CTTAACCTGG GAACTGCATT TCGAACTGGT CAACTAGAGT
CTTGTAGAGG GGGGTAGAAT TTCAGGTGTA GCGGTGAAAT GCGTAGAGAT CTGAAGGAAT
ACCGGTGGCG AAGGCGGCCC CCTGGACAAA GACTGACGCT CAGGTACGAA AGCGTGGGGA
GCAAACAGGA TTAGATACCC TGGTAGTCCA CGCCGTAAAC GATGTCTACT CGGAATTTGG
TGTCTTGAAC ACTGGGTTCT CAAGCTAACG CATTAAGTAG ACCGCCTGGG GAGTACGGCC
GCAAGGTTAA AACTCAAATG AATTGACGGG GGCCCGCACA AGCGGTGGAG CATGTGGTTT
AATTCGATGC AACGCGAAGA ACCTTACCTA CTCTTGACAT CCAGAGAACT TTTCAGAGAT
GAATTGGTGC CTTCGGGAAC TCTGAGACAG GTGCTGCATG GCTGTCGTCA GCTCGTGTTG
TGAAATGTTG GGTTAAGTCC CGCAACGAGC GCAACCCTTA TCCTTACTTG CCAGCGGGTA
ATGCCGGGAA CTTTAGGGAG ACTGCCGGTG ATAAACCGGA GGAAGGTGGG GACGACGTCA
AGTCATCATG GCCCTTACGA GTAGGGCTAC ACACGTGCTA CAATGGTCGG TACAGAGGGT
TGCGAAGCCG CGAGGTGGAG CTAATCTCAC AAAGCCGGTC GTAGTCCGGA TTGGAGTCTG
CAACTCGACT CCATGAAGTC GGAATCGCTA GTAATCGTGG ATCAGAATGC CACGGTGAAT
ACGTTCCCGG GCCTTGTACA CACCGCCCGT CACACCATGG GAGTGGGCTG CACCAGAAGT
AGATAGCTTA ACCTTCGGGA GGGCGTTTAC CACGGTGTGG TTCATGACTG GGGTGAAGTC
GTAACAAGGT AGCCCTAGGG GAACCTGGGG CTGGATCACC TCCTTACCTA TACGATT
 
Protein sequence