| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3864 |
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| Symbol | |
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| ID | 4923988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4595573 |
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| End bp | 4598116 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640165490 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095986 |
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| Protein GI | 127514789 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000004588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGTTTCTA AAAGGAAGCA TTTAGATGTA GCTAGTTTTT TCATTGAGGA AAATTTTAAG
TCTAAAAGAA CCGGTCGAAA CCCAGGAGTT CCTGGACGAA ATAGAAACCA ACATGGAAGT
CACTTAAGAG GTCAATATCA GAATTTAATT GATGCTTATG ATCAAAAAAG AGAACATGAA
GTTGATACTA TAACGGATGA TTCAGGGATA TATGTTGAAA TTATTAGTGT AGATGGGTGT
AAGCTTCCGT TAGATAGTTT GGATAACAGA GATTTTAAAC TCTGTTCTTG TCAAATGCAG
GAAAATAAGG AGTTCGCTTT AGTCTTCATA CCTGAAGATC GGCGAGATAC TTTCCTTAAA
AAAATACAGC AGTATTTAGA TCCTCAAAAA GACGGAAAAC CAAATAAGGA TGGAGTATCT
TTTCCTCGAA ACCATGCATT AATAGATAGT ATTTCTGAGA TTAGGCTTGC AAGCTTAGAG
TCATTTTGGA CAGATCCACC AGAACTTTTT CCCACGGACC GAGACAACGA TGTTTGGTGG
GAGTTATGGT TGAAAAAAAA TGCAATTGAT GGTGTTGAAA ATATAGCAGC TTCTCTTGCA
GAAAGAGTAA ATGGTCGTTT AGGAAATACA TCCATATCAT TTTTCAACTC ATTTGTTGTT
CTTATTAAAT CTTCAGTTCG TAATTTAGAA AAAGCACCAG AATTGATTTC AAATTTAGAA
GAAATTCGAA AAGCTAAGGA CACACCTGTT CCAATACTTA GTTCTTCACC AAAGGAACAA
CAAGAGTGGC TGCAGAGCAT TTCTGATCGA GTTTCTTTTT CAGAGAATAT AACAACTAGT
GTATCAATCC TGGATACTGG CGTTAATTAT AATAACATGC TGTTAAGTAA AGTGTGTTGT
GATGATTTTG CAGTTTCTTG GGATCCTGAT TGGCCTAAAT ATGATCAATA TCAACCACTA
ACACCGTTTA ATGAGCATGG TTCGTTGCAA GCAGGACTAG CAGCATTTGG GAATTTGATG
GATGTCGTAT TGAAAAATAG CGCCATTCAA CTGTCACATG TTATTGAGTC AGCGAGAATT
TTACCTCCGC AAGGCAACAA TGATCCCTTG CTATATGGGG CTATAACGGT AGGAACAGCA
TACAAACTTG AAGTAGATAG GCCTGATTTA AATAGAGTAT ATAGTCTTGC TGTTACTTCT
GATCATGAGA GAGAAAGTGG CAGACCTTCT TCATGGTCTG CAGAAATTGA TCAATTCACT
TCTGGTATGC AAGATGGAAA GCGGAGACTT TTTGTTATTT CTGCCGGTAA CAATTTAGAT
ATTCGTCCTG ACCAAGACTA CTGGGATCAA GTAAATCTCG CGCAGATAGA AGATCCAGCT
CAAGCATGGA ATGCTATTAC CGTTGGGGCA TATACAGAAA TGACAACAAA TGATGATCCC
TATTTTGAAG GTTGGTCGCC GTTTGCGATG GAGGGAGATG TTGCTCCATC AAGTCGTTCT
TCAGTGAATT GGGCATGGAG AAGGCAAGCA CCATTTAAAC CTGATGTTGT TGCTGAAGGT
GGAAATCGGC TTTTGTCACC AGATAGGACG GAAGTTAGTA ATGAAGATAC GGTTGGATTA
TTAACAACAT CAGGAAGAAC CACAGGTCAG GTTTTTGAGC GGGGAAGTGA TACAAGCGCT
GCATGTGCTT TAGTTTCTCG GTGTGCGGCC CAGTTAACAG CCGAATATCC AGAATTTTGG
CCTGAAACTA TCCGAGGCTT AATAATCCAT TCTGCGGAGT GGACTCCACG AATGATGGAG
CGATTTGGGC TACTAAGTGC TGTGCATAGT CCTAAAGTGG CAAAAGAAAC CTTGCTACGT
ACGGTTGGAT ATGGTGTTAC AAATATTGAT AAAGCTAGAT ACAGTGCAGA TCATGCACTT
ACTTTGATCG CTGAGGGGGA GATTCAGCCA TTTATAAAAC CTCAAAATGC TAGTGCATCA
TCCGATCCTA AATTAAATCA AATGAAGCTT TATCAGTTAC CTTGGCCTTT GACTGAGCTG
CAAAACTTAC CGCCAGAGTT AGAGGTTAAA TTAAAAGTTA CGTTATCGTA TTTCATAGAG
CCTAACCCCG GAAGACGAGG TTATCGTACA AGATATAGCT ATCAATCTCA TGGTTTAAGG
TTTGAAACAA TCAGACCAGG GCAGTCACTA GAGAACTTCC GTGCTTACAT TAATGGTTTA
GCAAATATGG ATGATTATGA TGGGCCAGAG GGTGATAGTG ATGGGTGGTT CTTAGGAGAT
CAATTGAGAA CAAGAGGCTC AGTTCATTCA GATGAATGGA CTGGTAGTGC TCAAGATCTA
GCTGACATGC ACACCATAGC TGTTTTTCCT GTAGGCGGAT GGTGGAAGTA TAAAACTGCG
GAAGAACGGT GGGAAAATAG AGTGCGGTTT AGCCTTCTTG TTAGTATCGA AGTTCCGGAT
GAAAATGTTG ATATTTACTC TGTAATAGAA AATCAGATTC AAGTAGCAAT AGAAAATCAG
GTTGAAATAG AAATTACAAC TTGA
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| Protein sequence | MVSKRKHLDV ASFFIEENFK SKRTGRNPGV PGRNRNQHGS HLRGQYQNLI DAYDQKREHE
VDTITDDSGI YVEIISVDGC KLPLDSLDNR DFKLCSCQMQ ENKEFALVFI PEDRRDTFLK
KIQQYLDPQK DGKPNKDGVS FPRNHALIDS ISEIRLASLE SFWTDPPELF PTDRDNDVWW
ELWLKKNAID GVENIAASLA ERVNGRLGNT SISFFNSFVV LIKSSVRNLE KAPELISNLE
EIRKAKDTPV PILSSSPKEQ QEWLQSISDR VSFSENITTS VSILDTGVNY NNMLLSKVCC
DDFAVSWDPD WPKYDQYQPL TPFNEHGSLQ AGLAAFGNLM DVVLKNSAIQ LSHVIESARI
LPPQGNNDPL LYGAITVGTA YKLEVDRPDL NRVYSLAVTS DHERESGRPS SWSAEIDQFT
SGMQDGKRRL FVISAGNNLD IRPDQDYWDQ VNLAQIEDPA QAWNAITVGA YTEMTTNDDP
YFEGWSPFAM EGDVAPSSRS SVNWAWRRQA PFKPDVVAEG GNRLLSPDRT EVSNEDTVGL
LTTSGRTTGQ VFERGSDTSA ACALVSRCAA QLTAEYPEFW PETIRGLIIH SAEWTPRMME
RFGLLSAVHS PKVAKETLLR TVGYGVTNID KARYSADHAL TLIAEGEIQP FIKPQNASAS
SDPKLNQMKL YQLPWPLTEL QNLPPELEVK LKVTLSYFIE PNPGRRGYRT RYSYQSHGLR
FETIRPGQSL ENFRAYINGL ANMDDYDGPE GDSDGWFLGD QLRTRGSVHS DEWTGSAQDL
ADMHTIAVFP VGGWWKYKTA EERWENRVRF SLLVSIEVPD ENVDIYSVIE NQIQVAIENQ
VEIEITT
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