| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3827 |
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| Symbol | |
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| ID | 4922832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4557489 |
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| End bp | 4559579 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640165456 |
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| Product | transposon Tn7 transposition protein TnsB |
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| Protein accession | YP_001095952 |
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| Protein GI | 127514755 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00111993 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTCGAA TCAATGATGT ATTGGAGTTT GATCAGGAAC GTTTTCGAAT TCTACGTCGA
TTGGGAGATG CGTTTGTTTG GATATCAATC GACAGTCCTA GTCATTTCCC CGCGCTAATT
GATTTAGATA CGTTAACTGA AGCCATTCAT AATGGGGCTT TGCGTAGGGT TGATGATCCA
TATACGGATT TAATACTGTC ATCGCCACCC GACGGCAGCG TAGCCCAAGT GAAAAGGGAT
CAAAATTACG AGCTGATTGG CCCAATCATT GAGAGCGATG ATTTTTTCCT TCCTAAGGTC
AGAGCTAAAG CCATCGAAGA TGTGATGTCT AACAATAAGA CAACTAAGCA AACGTTGTAT
CGGCTTATTC GACAGTATTG GAAAAGAGGC CAGATCCCTA ACGCATTACT CCCCGACTAT
AAAAACTCTG GCGCGAAGGG CAAAAAGCGA ATTCCAGGAG AGAAAAAGCT CGGTCGTCCT
CGGAAGTATG AACCTGGGAC TGGCGTCAAT GTTGATGAAC TCATTGAAAA ATTGTTCAGG
ATAGCCATTC AAAAATATCT TCTTACCGAC AAGGGCTACT CATTTCCTTA TGCCCACAGG
CGCTTTAAGG ATATGTATGA GGCTTACTTT CCTGATATTC CAGAAGAGGA AATTCCGACG
AACTGGCAGA TGAAGCATTT CTATCAGCGT GAATATTCTC AAGTTGAAAA AATTAAAAGC
CGAGTCAATC GAAACAAGTA CAACAAAGAC ATTCGTCCGT TGACAGGCAC TGCAAATTTG
CATGCATTAG GTCCTGGCTC TCGTTTTGAA ATTGACGCGA CCATCGCTGA TATTTATGTG
GTCTCTGATG CAAATCGAAG CTGGATTGTT GGACGACCAG TTGTCTACAT TGTCATTGAT
GTTTTCAGCC GACTTGTCGT TGGGTTCTAC ATCGGCTTTG AAAACCCATC TTACGTAGCT
GCAATCCAGG CCATAAAGTC GGCTATGACT GACAAAGTAG AACTTTGTCA TCAGTTTGGA
TTGGATATTG AAGCGGAAGA TTGGCCAGCA ATTGGCTTAC CGGATTGTAT TCTAGCTGAT
CGGGGAGAAC TGCTCGGGTA CCAGATAGAA AATCTTGAAA AAAGCTTCTC TATTCGAATT
GAAAATACGC CGCCATTTCG TGGTGATGCC AAAGGCATTG TTGAGCAGAA CTTTAATGTC
TTGCAGGCTG ATTATACTCC CTTTGCCCCT GGCGTTGTGA CAGGTAACAC CGTAAGAAAA
CATGGGGGTA AGGACTATCG TCTTGATGCC AAGCTGTCTA TATCTGATTT TAAAGAAATC
ATAATTTCTT CAATTATTTA TCATAATAAA TATCATGTGT TGAAAAAGTA TGATCGGTCT
GCCGATATGC CAGTGGATCT TCCCAATGTT CCATTAGAAT TGTGGAACTG GGGAGTGAAG
AATCGTACTG GACGTTTGCG CGCCGCTTCA GAAGCGTCAA TCAGGTTGAG TTTACTCCCG
AGAGAAAACG CTACTGTTTC AACGTTAGGA ATTTGTGTTT TCGGTGTTTA TTACACTTGT
CAGGAGATGA TTGCAGAAGG TTGGATGCAC AGAGCAAAGG AAGTTTCTCG ACCTGAAAAA
GTGGTTGTTG CCTATGATCC TGATTCTGCG TACGAAATTT ATTTATTTCC TTATACCAAT
AGTGCTGAAC ATTGGATTTG TAAACTTTCA GAACGTTCTA GAGAGTTTGT AAATTGTTCC
TTTTGGGAAG TGTGGCAGCG CCAAGAGCAG TTGAAGGTTA CTGCGGCTAA CAGTCGCATT
AGAGCTAGCA AGCATAAAAG AGAGCATGAA CGTCGAGTCA TAGACAAAAT TCAACAGGCA
GAAAAATTGA GTCCTGATGT ATCGGCTCTG ACCAAGGCTG AACGGATAGC TGCAATTAGG
CCCAATCGCA AAGCAGAACT TCAAGATGAG CGGGAAGCGC GAAAACCTCG TGTCCCTGAG
AATCCTGAAG GAACGGCAGA GGTCATCCCT TTGCCTAATG TTGTTCAGGA AAACTACGAT
TACCCTAGTT ATGTTGATGA GTTATTTGAT GACGAGGATG GTAACGAATG A
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| Protein sequence | MFRINDVLEF DQERFRILRR LGDAFVWISI DSPSHFPALI DLDTLTEAIH NGALRRVDDP
YTDLILSSPP DGSVAQVKRD QNYELIGPII ESDDFFLPKV RAKAIEDVMS NNKTTKQTLY
RLIRQYWKRG QIPNALLPDY KNSGAKGKKR IPGEKKLGRP RKYEPGTGVN VDELIEKLFR
IAIQKYLLTD KGYSFPYAHR RFKDMYEAYF PDIPEEEIPT NWQMKHFYQR EYSQVEKIKS
RVNRNKYNKD IRPLTGTANL HALGPGSRFE IDATIADIYV VSDANRSWIV GRPVVYIVID
VFSRLVVGFY IGFENPSYVA AIQAIKSAMT DKVELCHQFG LDIEAEDWPA IGLPDCILAD
RGELLGYQIE NLEKSFSIRI ENTPPFRGDA KGIVEQNFNV LQADYTPFAP GVVTGNTVRK
HGGKDYRLDA KLSISDFKEI IISSIIYHNK YHVLKKYDRS ADMPVDLPNV PLELWNWGVK
NRTGRLRAAS EASIRLSLLP RENATVSTLG ICVFGVYYTC QEMIAEGWMH RAKEVSRPEK
VVVAYDPDSA YEIYLFPYTN SAEHWICKLS ERSREFVNCS FWEVWQRQEQ LKVTAANSRI
RASKHKREHE RRVIDKIQQA EKLSPDVSAL TKAERIAAIR PNRKAELQDE REARKPRVPE
NPEGTAEVIP LPNVVQENYD YPSYVDELFD DEDGNE
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