| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3770 |
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| Symbol | |
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| ID | 4920762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4490341 |
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| End bp | 4491147 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640165396 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001095895 |
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| Protein GI | 127514698 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.476398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTTA AATACCTCAA ATTTATTAGC TGCTTAGTCT TGATTGCTGG TAGCTACTGC
CTGCCACTTG CGGCCAAGAT CAAAGTAAAG CCGCTGCCGA TTCAGCTGGA GAGCTGTGAG
CGTGGCGAAT GCGTCGATCA TTTCAAGGAA TACAAGACGC TGGCCCGTTA TGGCCATTCC
GATGCTATGT ACACGCTGGC CGAGATGTAC CGTCTGGGCT ATGGCACAGA GAGCGATATG
CGCTTATCCA CTAAGTGGTA TCGCCGCGCC GCCAAGTTAG GCAACCCTTT TGCTCAGTAC
AAGGCGGCCA TCCTCTATCT ACAGGAGGGT GAGAATCAGG ATATCGACAA GGCGATGCGC
TACCTGCGAG ACGCCAACCG CGCCGATCTT AACGAGGCGG CTCACCTGTT GGGAATGCTC
TACGTAGAAG GCGAGCTGGT GGAGAAGGAC AAGGTGAAAG CCAAGGACTA CCTGACCAAG
GCCTATGAGG CGGGTCATGA GCCGACACTT AATCTGCTTG CCGAAGTTAG CGAGGTGGCC
CTCGAGGTCA AGCGCCAGGC TAAGGTGGCG CCGGTTACGC CCAAGAGTCA GGCCGCTCCG
ACAGATGAGA TGGAGGTGAT CGAGGTTCGT GCCCCTAGTT TGGAAGAGGT CTTTTCCTAC
CATATCGCCA CTTTGCGTGC TCGTGTGCCC GATGGCATCA GTAGTACGGG GACCTCGCTG
CGGGGTCGTA CCTGTGGCGA GATGATCTCC TGTAATACTC AGGAAGACAG AGAGCGTATT
CGCGATTTTC TCATGTCCAC CTGGTAA
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| Protein sequence | MTVKYLKFIS CLVLIAGSYC LPLAAKIKVK PLPIQLESCE RGECVDHFKE YKTLARYGHS
DAMYTLAEMY RLGYGTESDM RLSTKWYRRA AKLGNPFAQY KAAILYLQEG ENQDIDKAMR
YLRDANRADL NEAAHLLGML YVEGELVEKD KVKAKDYLTK AYEAGHEPTL NLLAEVSEVA
LEVKRQAKVA PVTPKSQAAP TDEMEVIEVR APSLEEVFSY HIATLRARVP DGISSTGTSL
RGRTCGEMIS CNTQEDRERI RDFLMSTW
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