| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3764 |
|---|
| Symbol | |
|---|
| ID | 4920756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 4482242 |
|---|
| End bp | 4483474 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640165390 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001095889 |
|---|
| Protein GI | 127514692 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.658461 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTCG TTAAGTCTTG TATCAAGATA TGTCTGTTGA CCGCATTAAG TAGCAGTAGT
TTCTTTGGCT ATGCGGCCTC GACACATCAA CTCCACCACC TGCTGAAGAT CAGTAAGTCC
AGGCTTCCCA ATGCCAGCGC CGAGGCGCCC GTCGTCGCGG ATGAACGCGC CCAGCAACTG
AGCAGCTCAG GCTGGTTGAT GGGGCTCCCC AGCATCAGCC TGAGCCATCT GGGCAGCCTG
GACAATGGTA ACAGCTACGA GCAGGAGGTG TCGCTCAATT TGCCATTAAA GCCCCCCGGC
GCCTACGACA GCGACAGCCA GATCAAGCAG TTGTCCCAGG CCATCGGCAG CCAGCAGCAG
GCGCTGCAGA ATCTCTACCT CTCCGGCCTT ATCCGTCAAA GCATCTGGGA CTATCGTCTC
GCCAGCGTCA AGCTGGCCCA GCTGGAGCGC AAACGTAAGC TGCTGGATAA GCTGCATCAA
CAGCAGAAGC GCCTCACCGA CGTGGGCGAG CTGCCTGTGG CTAATCTGCT GCTACTCGAG
CGCGAGCAGG TGGATATCGA CCTGCAGCAG ATCCAGCTCA AACAGCAACA GGCCGAGGCG
GCCTCGCTGT TTTACCGTCT CACGGGCCAG CAGCTGCCAC CTGAATCCAT CGATGATGAG
CCAAGCGCCA AGCTGTGGCA GGTGTCAGAG TTCGACAACC AGCTGGCCCA GCACCCCCTG
TGGCAGCTGC AGCGACTACA GCAGCAACAG GCGCGTCTGA TGATCGAACG TCAGCAGGCG
GGCACACAAG ATCCCTGGAC CCTCTCACTC ACCGCCAAGC GCACCGCCGA CGACCAGCTG
GACGACAATC AGCTGGGGTT GGGGATCACT GTCCCCCTCG GGGTGAGCTC CGCCCTGTCC
CAGAGCGATC TCGCCAGCTG GCAACAGACC AACCAGGAAC AACTACTGCA AAGCGATCGC
ACCTATCTAC AACTCAAGAC CCAGGCGGAG AAGCTGGCCA AGCAGCAAGA GACGCTCGGC
CAGCAGCAGC GACTGCTCAA GCAGGGGCTC TCCCTGAGCC GCACCATCAC CGAAGAGCTG
GCCAAGGTGA AAGATCAGAA CCAGGTGAGC TATGAGATCT GGCTGCGCCG CTATATGGAT
GCGCTGGATA CCGAATCACG CCTGGCGCTG AACCGGGTCA GCCAACAACA ACTCCATTCT
CAGCAACTAC AAGCCTTAGG AATCTCATTA TGA
|
|---|
| Protein sequence | MSVVKSCIKI CLLTALSSSS FFGYAASTHQ LHHLLKISKS RLPNASAEAP VVADERAQQL
SSSGWLMGLP SISLSHLGSL DNGNSYEQEV SLNLPLKPPG AYDSDSQIKQ LSQAIGSQQQ
ALQNLYLSGL IRQSIWDYRL ASVKLAQLER KRKLLDKLHQ QQKRLTDVGE LPVANLLLLE
REQVDIDLQQ IQLKQQQAEA ASLFYRLTGQ QLPPESIDDE PSAKLWQVSE FDNQLAQHPL
WQLQRLQQQQ ARLMIERQQA GTQDPWTLSL TAKRTADDQL DDNQLGLGIT VPLGVSSALS
QSDLASWQQT NQEQLLQSDR TYLQLKTQAE KLAKQQETLG QQQRLLKQGL SLSRTITEEL
AKVKDQNQVS YEIWLRRYMD ALDTESRLAL NRVSQQQLHS QQLQALGISL
|
|---|
| |