| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3704 |
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| Symbol | |
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| ID | 4921216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4408268 |
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| End bp | 4409338 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640165326 |
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| Product | dTDP-glucose 4,6-dehydratase |
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| Protein accession | YP_001095829 |
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| Protein GI | 127514632 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
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| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.524405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGTG AACAGCATCA CCCGTTAGCC GGGCGCAATA TCTTGATCAC TGGCGGCGCT
GGCTTTATCG GCTCGGCCTT GATTCGCCAC CTCATCGCGC TAGGCGGTTG CCGCGTCGTG
AACTATGACA AGCTTACCTA TGCCGGCAAT CTGGCGTCGC TAGAATCCAT TGCACAAGCT
CCCAACTACC ATTTCATTCA GGCCGATATC AATGATGGCG ATACCCTGGG CGGAGCCCTC
AGGCAATACC AGATAGATCT GGTGATCCAT CTGGCAGCGG AGACCCATGT GGACCGCTCT
ATCGAGGGGC CCAGAGCCTT CATCGGCACC AATATTGTCG GCACCTTCGA GCTGCTGCAG
CAATGCCTAG ACTATTATCG CAAGCTGCCG ATCGAGATTG CGGCACGCTT TCGCCTGCAC
CATGTCTCGA CCGATGAAGT ATTTGGCGAC TTAGGCTCAG ACGAGGCGGG ATACTTTAGC
GAGCAATCTC CCTACGCTCC CAGCTCACCT TATTCCGCCA GTAAGGCCGC GGCGGATCAT
CTGGTGAGGG CCTGGCATCG CACCTACGGC CTGCCGGTAG TGCTGTCGAA CTGCTCCAAC
AACTATGGCC CCTATCAGTA TCCGGAGAAG CTGATCCCCG TGACCCTGCT CAACGCCCTG
CAGGGAAAAT TGATTCCCGT CTATGGCGAC GGCAAGCAGA TCCGCGACTG GCTCTATGTG
GACGACCACG CCCATGCCCT GTGCCAGGTG GCAGCTCGGG GCGAGCTAGG CGAAAGCTAC
AACATAGGCG GCATGAATGA GATGACGAAT CTCGAAGTCG TCAGCCTCAT CTGCGATCTG
TTAAATCAAA AAGTCACCGA GAAGCCCTGC GGCATCAGCG ACTTCAGGCA ACTCATCGGC
TTCGTCAAAG ACAGGCCCGG GCACGACACC CGCTACGCCA TTGACGCCAG CAAGCTGAGC
CGCACCTTAG GCTGGCAGCC CAGCGAAAGC TTCGCCAGCG GCCTGGAGAA GACGGTGGAC
TGGTATCTGA CGCACCTGGA TTGGTGCCAT CAGGTGGCGG GCCAGTCATG A
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| Protein sequence | MNSEQHHPLA GRNILITGGA GFIGSALIRH LIALGGCRVV NYDKLTYAGN LASLESIAQA
PNYHFIQADI NDGDTLGGAL RQYQIDLVIH LAAETHVDRS IEGPRAFIGT NIVGTFELLQ
QCLDYYRKLP IEIAARFRLH HVSTDEVFGD LGSDEAGYFS EQSPYAPSSP YSASKAAADH
LVRAWHRTYG LPVVLSNCSN NYGPYQYPEK LIPVTLLNAL QGKLIPVYGD GKQIRDWLYV
DDHAHALCQV AARGELGESY NIGGMNEMTN LEVVSLICDL LNQKVTEKPC GISDFRQLIG
FVKDRPGHDT RYAIDASKLS RTLGWQPSES FASGLEKTVD WYLTHLDWCH QVAGQS
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