| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3679 |
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| Symbol | |
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| ID | 4921763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4382549 |
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| End bp | 4383217 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640165301 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095804 |
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| Protein GI | 127514607 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1738] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00697] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000848067 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAATGT TATCCCAAGC GCAGATTCAG CGTGCGCTAC TGCTGCTCGT CAGCTTTCAT
ATTGCCATTA TCACCGCAAG TAACTACTTG GTTCAGCTAC CCTTTCAGCT ATTTGGTTTT
CATACCACCT GGGGCGCCTT TAGCTTTCCC TTCGTCTATC TGGCCACAGA TCTGACGGTG
AGAATCTTCG GCCAGCAGTC GGCGCGTAAG ATCATCCTCA GGGCCATGAT ACCTGCGCTG
TTGATCTCCT ATCTGATCGG CGTGCTCTTC CATCAGGGCA GTTTTCAAGG TGGCGACGCC
TTAGCGCAGT TCAACAACTT CGTGTTTCGT ATCGCCTTCG CCAGCTTCGC CGCCTATCTG
GTGGGCCAGC TGATGGACAT TACCGTGTTT GCCCGCCTAA GACAGGCCAA GGCCTGGTGG
GTAGCGCCTG CCGCCTCGAC GGTTATCGGC AATCTTATCG ATACCCTGGT CTTCTTCAGC
GTGGCCTTCT ATGCCTCGAG CGATCCCTTC ATGGCCGAGC ACTGGATGGA GATCGCCAGC
GTCGACTATG GCTTCAAGCT GATCGTTAGT CTGGGCCTCT TCCTGCCAGC CTACGGCGTC
TTGCTCAGGG TATTGCAGGA GCGAATTTTG CGAGAAGGCC AGACAAAATC GCAAAGCAAA
CTGGCCTGA
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| Protein sequence | MLMLSQAQIQ RALLLLVSFH IAIITASNYL VQLPFQLFGF HTTWGAFSFP FVYLATDLTV
RIFGQQSARK IILRAMIPAL LISYLIGVLF HQGSFQGGDA LAQFNNFVFR IAFASFAAYL
VGQLMDITVF ARLRQAKAWW VAPAASTVIG NLIDTLVFFS VAFYASSDPF MAEHWMEIAS
VDYGFKLIVS LGLFLPAYGV LLRVLQERIL REGQTKSQSK LA
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