| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3675 |
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| Symbol | |
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| ID | 4921759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4376224 |
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| End bp | 4377588 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640165297 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001095800 |
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| Protein GI | 127514603 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTGG TGCGACTCAG TCAGATCCAT TTTAACTTCC AGACAGCGGC GCAGCCGCTG
TTTGAGGATC TTAATCTGAC CATAGCGGCC GGCGAGTGTC ACCTGATCCA CGGCTACACC
GGCTGTGGTA AGTCGACTCT GCTCAAGCTG CTGCAGGGGA TCCTGGAGCG TCCCTGGGAG
GGGGAGCGTG AGATCGCCGA GGGGGCGACC CTGGGCGTGG TGATGCAGGA CCCCAATGTG
CAGCTGCTGC GCCAGACGCT GGGGGCCGAG GTGGCCTTCG CCCTGGAAAA CTTAGGCGTC
GCCAGCAGTG AGATGCTGCT GCAGGTGCGC TCGGCCCTAA GACGGGTCGG CCTCTATATC
AGCCTAGACA CGCCCATCGC CAGCCTCTCT CTGGGACAGC GTTATCGCCT GATGATCGCC
GCCCAGCTGG TGCTCGAGCC AGACCTCTTG TTGCTCGATG AGCCCTGGGC GCAGCTGGAC
GATCAGGGAG TGGCCGAGCT GTCGGCCGTG CTCCACCAAC TCAAGCAGCA GGGCGTGGCT
CTGTTGATCG TCGAGCATCA CAGAGGCGTC TTCAAGGATC TGGTTACCCA CAGATGGCAG
CTCAGTCAGG GCCAACTGCA GGCGTTAGCG CCGGCGGAGT GTGAAGCGAC TTCGGAGCAG
GTAAGTTGGC GCGAGTCGCC GGCCTGGCCG CAGGGTAGCG CCGTCATCGA CAGTCATGGC
TTTACCTTAG CGTTTCGTGA GCGCCAGAAG CTGTTCGACG CCGACTCCCT GCTGCTCTTC
CCCGGTGAGA TTGCCGCCCT GGTGGGCGAC AACGGCTGCG GCAAGAGTAC CCTGCTCAAG
AGTCTGGCCG GTATTCAGGC GGATATCGAT CCCTTGGGCA TCAAGGTGTT TGGCAAGAAG
CCCAAGTTGG GACGCTTCGG CGCCGACCTT GCCTTGCTGC ACCAGCGGCC GAGTCGACAG
CTGTTTGAAA ATACCGTTAT CGAGGAGATG CAGTTTAGCC TCAAGCGTTT CGGCTTGCCG
CTGGAGCGGG CCATCGAACT CCTGGGGCAA CTTGGGTTGA CTACATTGGC GCGGCACTCG
CCTCATACGC TCTCCTACGG TCAGCAGCAT CTGATCGCCC TGGCGTCGCT AGCCTGTCTC
AGGCCCAAGC TACTGCTACT GGATGACCCG TTCGCCGGGC TGGACGAGCA CTTCACCGAC
AAGATAGTGG CGCTGCTGAC CGAGCTGAGC CGTCAGGGCA CAGCCCTGGT GATCGCCAGT
CACAGGCCGA TTGCGGCGCT GCCGGTGGAT CGCCTCTGGC GGGTGGTGGA TGGGCGTCTC
GAATCTCTCT CGGCCTCGCC ACAGGCGTAT TCACGTGTGG GCTAG
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| Protein sequence | MALVRLSQIH FNFQTAAQPL FEDLNLTIAA GECHLIHGYT GCGKSTLLKL LQGILERPWE
GEREIAEGAT LGVVMQDPNV QLLRQTLGAE VAFALENLGV ASSEMLLQVR SALRRVGLYI
SLDTPIASLS LGQRYRLMIA AQLVLEPDLL LLDEPWAQLD DQGVAELSAV LHQLKQQGVA
LLIVEHHRGV FKDLVTHRWQ LSQGQLQALA PAECEATSEQ VSWRESPAWP QGSAVIDSHG
FTLAFRERQK LFDADSLLLF PGEIAALVGD NGCGKSTLLK SLAGIQADID PLGIKVFGKK
PKLGRFGADL ALLHQRPSRQ LFENTVIEEM QFSLKRFGLP LERAIELLGQ LGLTTLARHS
PHTLSYGQQH LIALASLACL RPKLLLLDDP FAGLDEHFTD KIVALLTELS RQGTALVIAS
HRPIAALPVD RLWRVVDGRL ESLSASPQAY SRVG
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