| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3623 |
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| Symbol | |
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| ID | 4922409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4320611 |
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| End bp | 4322152 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640165245 |
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| Product | phosphoenolpyruvate carboxykinase |
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| Protein accession | YP_001095748 |
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| Protein GI | 127514551 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1866] Phosphoenolpyruvate carboxykinase (ATP) |
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| TIGRFAM ID | [TIGR00224] phosphoenolpyruvate carboxykinase (ATP) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGATG GATCTAAGCA AACTCATAAA AATCCCTCTA CGGCACAACT AGTTGAGTTT
GCACTCGCAC GCGGCGAAGG AGAGCTAACG GCGAATGGTG CATTAGTGGC AAAAACCGGC
GAGCGTACCG GGCGTTCACC GAACGACCGC TTTATCGTGA AAGAAGCGAG CAGCGAAAAT
GATATCGATT GGGGCTCGGT CAACAAGCCG TTCGCCATGG ATGCCTTTAA CGCCCTATGG
GATCGCGTCG CAACTTACCT GGCCGACAAA GAAACTTTCG TTTCTGAGCT GGAAGTGGGT
GCCGACCCTG AGCACTACCA ACCCATTGAA GTTAAAACTG AAACCGCCTG GCATCAGCTC
TTTGCCCGTA ACCTGTTTAT CGTACCTGAG CAGTTTAACG TGGCCAACAA GCCTGTATGG
CAGATCATGA ACGCACCGGG TTTCGAGTGC GATCCTGCTC GCGATGGCAC CAACTCAGAC
GCCACCGTCA TCATCAACTT TGCCGATCGC AAGGTACTGC TGGCTGGCCT GAAGTACGCC
GGCGAGATGA AGAAGTCTAT GTTCTCTGTG CAAAACTTCC TACTGCCCGC CAAAGGCGTG
CTGCCAATGC ACTGCTCGGC CAACGTCGGC AGCGAAGGCG ACACAACCCT ATTCTTCGGC
CTGTCAGGCA CGGGCAAGAC CACACTGTCT GCCGATCCTA AGCGTTTCCT TATCGGCGAC
GACGAGCATG GCTGGGCACC AGGCGGCGTA TTCAATATCG AAGGCGGCTG CTACGCCAAG
TGTATCGATC TGAGCCAGAA GAACGAGCCG GTGATTTGGG ATGCAATCCG TTTCGGCACC
GTACTGGAAA ACGTCACCCT GGACGAGCAA CGCATCCCTG ACTACAGCAA CACAGAGCTG
ACCGAGAACA GCCGCGCGGC CTATCCGCTA GAGCACATCG CTCAGCGTAA GGAAGAGAAC
CGTGGCGCCG AGCCAAATGC CGTCGTCTTC CTGACCTGTG ACGTCTCTGG CGTGCTGCCA
CCTGTGTCTA AACTCAGCAA AGAGCAGGCG GCCTACCACT TCCTTTCTGG TTACACGGCT
AAGGTGGGGT CAACCGAGAT GGGCTCTACT TCTGCGATTC AATCAACCTT CTCGACCTGT
TTCGGCGCAC CATTCTTCCC ACGTCCGGCA GGCGTCTACG CCGAGTTGCT GATGAAGCGT
ATCGAGTCAT TCGGTAGCCA GGTTTACCTG GTCAACACCG GCTGGACCGG CGGTCCACAC
GGCGTAGGTA AGCGTTTCGA TATCCCAACG ACCCGTGCCA TCGTCGATGC CATAGTAAGT
GGCGAGCTAA AAGACGTGGA AACGGTTCAC ATCGACAAGC TGAACCTTGA CGTGCCAGTA
GCTGTGACTG GCGTCGATGC CAAGCTGCTT AACCCGGTCA ACACCTGGGC CGACAAGGCA
GAGTACGACA AATATGCTCA GCAGCTGGCC GAAGAGTTTG CCGCCAACTT CACTAAGTAC
GACGTGTCTG ACGCCATCAA GCAGGCTGGC CCTAAGGCGT AA
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| Protein sequence | MADGSKQTHK NPSTAQLVEF ALARGEGELT ANGALVAKTG ERTGRSPNDR FIVKEASSEN
DIDWGSVNKP FAMDAFNALW DRVATYLADK ETFVSELEVG ADPEHYQPIE VKTETAWHQL
FARNLFIVPE QFNVANKPVW QIMNAPGFEC DPARDGTNSD ATVIINFADR KVLLAGLKYA
GEMKKSMFSV QNFLLPAKGV LPMHCSANVG SEGDTTLFFG LSGTGKTTLS ADPKRFLIGD
DEHGWAPGGV FNIEGGCYAK CIDLSQKNEP VIWDAIRFGT VLENVTLDEQ RIPDYSNTEL
TENSRAAYPL EHIAQRKEEN RGAEPNAVVF LTCDVSGVLP PVSKLSKEQA AYHFLSGYTA
KVGSTEMGST SAIQSTFSTC FGAPFFPRPA GVYAELLMKR IESFGSQVYL VNTGWTGGPH
GVGKRFDIPT TRAIVDAIVS GELKDVETVH IDKLNLDVPV AVTGVDAKLL NPVNTWADKA
EYDKYAQQLA EEFAANFTKY DVSDAIKQAG PKA
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