| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3602 |
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| Symbol | |
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| ID | 4922507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4299892 |
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| End bp | 4301406 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640165224 |
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| Product | O-succinylbenzoate-CoA ligase |
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| Protein accession | YP_001095727 |
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| Protein GI | 127514530 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR01923] O-succinylbenzoate-CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0139548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGCACG GCAAGGAAAT TAGCCAGGAA ATTAGCCAGG ACATTGGTCA GGAAAGCATA
GACACCTCAC CGCTGCACCT GATGGCGGCC AAGGTGCCCG GGCAAGTTGC CCTGCACCAC
TGGCATGATG GTGGTTATCA CGCCATCGAC TATGCTCATC TCGCCCAAAG GGTACGACAG
TGCGCGCGCC AGCTGCATGA TCTGGGCGTA ACATCAGGCG ACAAGCTGGC CTGCGTCGAC
CAAAACTCTC TGGCACTGGT GATCCTCTAC TGGGCCTGCA TCGATCTCGG CGCCATCTTC
TGCCCGTTAA ACCCAAGGTT TCCCAAGGCG CAGATAGCCG CGATAGCCGA GCGCTACGGC
TTTAACCATT TCTGGGCTGG CCAGGCCTAT CAAGCCTTGT TACCGGAGCC AGGCCTGACG
CTCAGCTTAA ACGCCGAGAC TCGCGATAAC AAGTTAAAAG CAACCAAGGC AGAAGCAACC
AAAGTAGAAG CAATCAGGAT AGACACGGCG CGGCCCTGCA ACATCATACT CACCTCGGGC
AGCAGCGGCA TGCCCAAAGC CGCCGTGCAC TGCCTCAATA ATCATATCGC CAGCGCCCTG
GGCTCGACCC AGAAGATCCC CCTTGTTCGC GGGGACAACT GGCTGCTCTC CCTGCCACTG
TTTCATATCG GCGGCCTGGC CATAGTCAAT CGTTGCGCCT TGGCTGGCGC GGCCCTGACC
CTGCCAGCGC CCGATCTGTC GTTGGCAAAG CAGCTAAAGG CAATGCCCCT GACTCACCTC
TCCCTGGTGG CCACTCAGCT GGTGAGATTG CTTAACGACG CACCCGAAAC CCTCAAAGGG
CTCAAGGCGC TGCTGCTGGG TGGCGGCGCC ATAGATGAGC AGCTGATCGA ACGCCTGACG
CCGCTGGGCA TCCCCGCCTT TACCAGTTAC GGCATGACAG AGATGAGCTC GCAGATCACC
ACGGCTAGGG CCAATGCCCA GGGCAGTTGC GGGTTTGCCT TGCCCGGACG CGAGCTGAAA
ATTGTCGATG AGGTGATCTT TGTGCGCGGC GAGACACTGT TTCTCGGTTA TCTGAGAGAT
AAGCCGCCCC ATGAGATCAG CAGACCGCTG GATAACGATG GCTGGTTCTG CACCCAAGAT
CGCGGCCGAT TCACGCCCGG TGGTGAGCTG CTCATCCTGG GGCGCACAGA CAACATGTTT
ATCTGTGGCG GCGAAAACGT GCAGCCCGAG GAGATAGAGG CAGTGCTGAG AAGCTATCCC
GGCATCGAAG AGGCATTGGT GTTTGGCGTA GCCGACGAGG AGTTTGGCCT GCTGCCGGCG
GCCATCATCA AGGGGAAAGT CGCATCGCCT GCAAAACTCG AAGAGTTCCT CTGCCAGCAT
ATCGCCCGCT TTAAACGCCC AAGGCGCTAT TTCCCCTGGC CCGAGGTCGA GCAGACGGGG
CTCAAGTTGC CCCGCAAGCT CGTGATACAA GCGGTGGCCG AGCGCCATGG ATTAGTTACA
AAAAAACCTG CTTGA
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| Protein sequence | MKHGKEISQE ISQDIGQESI DTSPLHLMAA KVPGQVALHH WHDGGYHAID YAHLAQRVRQ
CARQLHDLGV TSGDKLACVD QNSLALVILY WACIDLGAIF CPLNPRFPKA QIAAIAERYG
FNHFWAGQAY QALLPEPGLT LSLNAETRDN KLKATKAEAT KVEAIRIDTA RPCNIILTSG
SSGMPKAAVH CLNNHIASAL GSTQKIPLVR GDNWLLSLPL FHIGGLAIVN RCALAGAALT
LPAPDLSLAK QLKAMPLTHL SLVATQLVRL LNDAPETLKG LKALLLGGGA IDEQLIERLT
PLGIPAFTSY GMTEMSSQIT TARANAQGSC GFALPGRELK IVDEVIFVRG ETLFLGYLRD
KPPHEISRPL DNDGWFCTQD RGRFTPGGEL LILGRTDNMF ICGGENVQPE EIEAVLRSYP
GIEEALVFGV ADEEFGLLPA AIIKGKVASP AKLEEFLCQH IARFKRPRRY FPWPEVEQTG
LKLPRKLVIQ AVAERHGLVT KKPA
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