Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3572 |
Symbol | |
ID | 4922645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 4266250 |
End bp | 4267230 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640165194 |
Product | alcohol dehydrogenase |
Protein accession | YP_001095697 |
Protein GI | 127514500 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
TIGRFAM ID | [TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCAAGG CGCTCGTATT GACCCAGCTA GATAGACAGA CCCAAGCCGA TGTGAAACTG CTGCCTGAGA GCGATCTGCC CGAGGGTGAG GTGCTGGTGG AGGTGAGTTA CTCATCGCTC AACTATAAGG ATGGCCTGGC GATCACCGGC CTTGGCAAGA TCATTCGCGA GTTCCCCATG GTGCCTGGTA TCGACTTCGC CGGTGTGGTG AGCGAGTCGG CCGACTCTCG TTTTCAGCCC GGTGATGAGG TGATCCTGAC CGGCTGGGGC GTGGGTGAGA ACCATTGGGG CGGCATGGCC GAGAAGGCGC GGGTGAAGGC CGACTGGCTG GTGCCCATGC CTAAGGGCTG CGACGGCGCC AAGGCGATGA TGATAGGCAC GGCCGGCCTG ACCGCCATGC TATGTGTGCA GGCGCTGCAA CAGGCCGGCG TCACCCCGGA GCAGGGTGAC GTCTTAGTGA CAGGTGCCAG CGGCGGCGTA GGCTCGGTGG CTGTGACCTT GCTGGCTCAG CTAGGTTATA AGGTCGTTGC CAGCTCGGGC CGGGTCGAGG TGAATGGCGA CTGGCTAAAA GCCCTGGGCG CCAGCGAGGT GATCGATCGC AGCGAGCTTG AACAGGACAG CCGTCCGCTG GAGAAACAGC GCTGGGCGGG TGTGGTCGAT ACCGTAGGCA ACAAGGTGCT GGCCACGGCA CTGGCGCAGA TGCAATATGG TGGCAGCGCC GCCATCTGTG GTCTGGCGGG CGGTTTTGCC CTGCCAACGA CTGTGATGCC CTTTATTTTG CGCGGCGTGA ACCTCTTGGG TATCGATTCT GTGGCTTGCC CCATCGACAA GCGCGTTAAG GCCTGGCAGC AGGTGCTCGA TCTCCTACCC GAAAGCTACT ATCAGCAGGC CTGTCAGACC ATAGGCCTGG AGCAATTGGG CGAGTACGCC AACAAGATAG TCAAAGGCAA GGTCACCGGC CGGGTATTGG TTAAGGTGTA G
|
Protein sequence | MFKALVLTQL DRQTQADVKL LPESDLPEGE VLVEVSYSSL NYKDGLAITG LGKIIREFPM VPGIDFAGVV SESADSRFQP GDEVILTGWG VGENHWGGMA EKARVKADWL VPMPKGCDGA KAMMIGTAGL TAMLCVQALQ QAGVTPEQGD VLVTGASGGV GSVAVTLLAQ LGYKVVASSG RVEVNGDWLK ALGASEVIDR SELEQDSRPL EKQRWAGVVD TVGNKVLATA LAQMQYGGSA AICGLAGGFA LPTTVMPFIL RGVNLLGIDS VACPIDKRVK AWQQVLDLLP ESYYQQACQT IGLEQLGEYA NKIVKGKVTG RVLVKV
|
| |