| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3476 |
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| Symbol | |
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| ID | 4922478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4162947 |
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| End bp | 4163834 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640165098 |
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| Product | transporter DMT superfamily protein |
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| Protein accession | YP_001095601 |
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| Protein GI | 127514404 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATA TTGAGTATCG TAAAGGGGTA GCGCTCGCCA TCTGCGCCTA CTGCCTCTGG
GGCTTTGCTC CCCTCTATTT TAAGCTGCTA AACCATGTGT CGGCGACCGA GATCCTGCTG
CATCGCGTGA TCTGGTCCTT CGTCTTCATG TTGATCTTGA TGCAATTTAT CGGTGGTTTC
GCCAAGCTAC GTGCCCTATT TAGGCAACCT AAACAGCTCG GGGTATTAGC GCTCACCTCG
GTTCTGATCG CCGGCAACTG GTTGCTGTTC ATCTGGGCGA TCAACAATGA TCATATGCTC
GACGCCAGCC TAGGCTACTT CATCAACCCC CTTATTAACG TATTGCTGGG CATGGTGTTC
CTACAGGAAC GTCTGCGTAA GCTACAGTGG GCGGCCGTAT CACTGGCCTG CGCCGGCGTA
CTGATCCAAT TGATCTCTTT TGGCTCGATT CCTGTGGTGT CCCTGGGGCT TGCCGCCTCA
TTCGGCGTTT ACGGCTTGCT GCGCAAGAAG GTCAATATCG ACGCCAAGAC GGGACTACTG
GTCGAGACGG CCATCTTAGT GCCTGTGGCC CTGCTCTATC TGGCAATGAA TCTCGATGAC
ACCAGCATCC TGGAAAATAG CTGGCAGATG AACCTGCTGC TGATGGCGGC CGGGATCGTC
ACCTCGATTC CCCTGCTCTG CTTTGCTGGC GCCGCCACGC GTATCCCATT GTCTATGCTA
GGCTTCTTCC AATATATTGG CCCCAGCATC ATGTTTATCA TGGCCGTCAG CCTGTTTAAC
GAACCCTTCG ATCTCGAAAA GGGGATCACC TTCGCCTTCA TCTGGAGCGC CCTGGTGATC
TTTACCCTGG ACCTGGCGTT AAAGAGTCGG CGTAAGCAGA CTGGCTAA
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| Protein sequence | MADIEYRKGV ALAICAYCLW GFAPLYFKLL NHVSATEILL HRVIWSFVFM LILMQFIGGF
AKLRALFRQP KQLGVLALTS VLIAGNWLLF IWAINNDHML DASLGYFINP LINVLLGMVF
LQERLRKLQW AAVSLACAGV LIQLISFGSI PVVSLGLAAS FGVYGLLRKK VNIDAKTGLL
VETAILVPVA LLYLAMNLDD TSILENSWQM NLLLMAAGIV TSIPLLCFAG AATRIPLSML
GFFQYIGPSI MFIMAVSLFN EPFDLEKGIT FAFIWSALVI FTLDLALKSR RKQTG
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