Gene Shew_3460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3460 
Symbol 
ID4923385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4144479 
End bp4144793 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content51% 
IMG OID640165082 
Productcell division protein FtsL 
Protein accessionYP_001095585 
Protein GI127514388 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG3116] Cell division protein 
TIGRFAM ID[TIGR02209] cell division protein FtsL 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.135005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAAGT CACAACTTAA CCTGACTCGT ATCGTATTAC TCGATCTTTG GCACCACAAG 
TGGGTGCTAT TGATGGCTTT TATTGTGATT GCGAATGCCA TTTTGGTGGT TTACACCAGC
CATTCCAGTC GCAAGTACAC CAGCCAGTGG GATCAGTTGC TGCAGGAGCG TGACCGCTTG
GATATCGAAT GGCGCAACCT GTTGCTGGAA GAGCAGTCGC AGTCGGAACA TAGCAGGGTG
ACACGGATTG CCACGAAAGA GCTGGAGATG AAGCGGCCGT TACCCAACGA AGAAGTGGTG
GTGAGAGTAC CATGA
 
Protein sequence
MSKSQLNLTR IVLLDLWHHK WVLLMAFIVI ANAILVVYTS HSSRKYTSQW DQLLQERDRL 
DIEWRNLLLE EQSQSEHSRV TRIATKELEM KRPLPNEEVV VRVP