| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3419 |
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| Symbol | |
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| ID | 4923573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4074739 |
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| End bp | 4075467 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640165031 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001095544 |
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| Protein GI | 127514347 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTGA TAAACGGTGA CTGGACGCTA GGTGAAGGGC GTCGCATCTT GCTGGTCGAG
GATGAGCCAG ACCTCGCCCG CCTGATCCGT CTCAACCTGG AATCTCTGCA ACATGAGGTG
ACCCAGGTCA ACACTTTGAA CCAAGCCAGG CAACAGCTGC GCAGCAAGTG TTTCGATCTC
CTGCTGCTGG ATCGCATGCT GAGCGACGGC GATGGCCTGA CCCTGTGCCA GCAGCTGCGT
CAGGAGGGCA AGAGCCTGCC CTGCATGATG ATCACCGCCA GAGACAGCGA GGCAGATATC
GTCCTCGGCC TGGAGTCAGG CGCCGACGAC TATCTGGTCA AACCCTTCAG CGTGTTGGAA
CTCAGGGCCA GGGTCAAGGC GCTGCTCAGA CGCTCCGCTC AGCAGGCAGC CGACCAGTAT
GCCCTCACCT TCGACGAGCT GGTGATCGAC AGCAAGACGC GTGAGGTCAC CGCCGCCAAT
CAGCCCCTGG CTCTCACCGC CAGGGAGTTC GATCTCCTCT ACTACCTGGC CCAACACCCA
CGTCAGGTAT TCAGCCGCAT GCAGCTGCTG GAAGCCGTGT GGGGATACTC CTATGCGGGT
TACGAACACA CGGTCAACAG CCACATCAAT CGCCTCAGGG CCAAGCTGGC CTGCTGTCCC
AGCAGCAACG AGCTGGTGCA GACGGTATGG GGCGTGGGCT ATAAGTTCGC CCCACCGGCG
GCGCACTAG
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| Protein sequence | MSVINGDWTL GEGRRILLVE DEPDLARLIR LNLESLQHEV TQVNTLNQAR QQLRSKCFDL
LLLDRMLSDG DGLTLCQQLR QEGKSLPCMM ITARDSEADI VLGLESGADD YLVKPFSVLE
LRARVKALLR RSAQQAADQY ALTFDELVID SKTREVTAAN QPLALTAREF DLLYYLAQHP
RQVFSRMQLL EAVWGYSYAG YEHTVNSHIN RLRAKLACCP SSNELVQTVW GVGYKFAPPA
AH
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