| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3346 |
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| Symbol | |
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| ID | 4923101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3990767 |
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| End bp | 3991450 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640164958 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095471 |
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| Protein GI | 127514274 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4461] Uncharacterized protein conserved in bacteria, putative lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0234924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAGAT TAGTCTTACT CGCCATTGCC AGCATACTGC TGCCAGCCTG CAGCCAGCAG
GCCACACAAA CCAATAGCGA GCCCTCTTCG AAAGCGCGCT CTGCAGCGCA AACCGAGAAT
CAGGCGCCAA ACAAGCCAGA GAATCACACG GCCAACCAGC CCAGCTTCGA CTGTGGCAGT
GACAAACTCT CCAGCATAGA GGTCTTGGTC TGCCAAGACA GCGAACTTGC CGCGCTGGAT
CGCCAGTTGG CCGAGGTCTA CCAGGCCGCC AGTGCCAAGG CCGTCAACGA GCAGCCGCCA
CTCTTGAAAG CCGAACAGAG AGGCTGGATA AAGGGGCGCG ACGAATGTTG GAAGAGTGAC
GACAAACATA GCTGCGCGTT TGACAACTAC CAGATGCGTA TCGCCGAGCT GCAGGCCAGA
TATCGCCTCA TCGCCCCCAG CGCCGAGGTC AGCTACCAGT GCGATGGCAT AGCCGCCAAA
GAGGTGGTGG TGAGCTATTT TGCCACCGAG CCAGCAACCC TAATCGCCGA GTTCGGCGAT
AGCGTCTCGC TCATGTACAG CCAGCCCAGT GGCAGCGGTA GCCGCTATCA GGGGCGCAAC
GAGTCGCTAT GGGAGCACCA AGGTGAGGCG CGCATCACCT GGGGCTATGG CGCCGAGCCG
ATGATCTGTA AGCTCGCCGA CTGA
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| Protein sequence | MNRLVLLAIA SILLPACSQQ ATQTNSEPSS KARSAAQTEN QAPNKPENHT ANQPSFDCGS
DKLSSIEVLV CQDSELAALD RQLAEVYQAA SAKAVNEQPP LLKAEQRGWI KGRDECWKSD
DKHSCAFDNY QMRIAELQAR YRLIAPSAEV SYQCDGIAAK EVVVSYFATE PATLIAEFGD
SVSLMYSQPS GSGSRYQGRN ESLWEHQGEA RITWGYGAEP MICKLAD
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