Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3245 |
Symbol | |
ID | 4921529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3881902 |
End bp | 3882798 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640164855 |
Product | polysulphide reductase, NrfD |
Protein accession | YP_001095370 |
Protein GI | 127514173 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.832914 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAG TGCATTGGGG GCTGTTGGTG GCAGCCTATC TGTTCTTGGC CGGTGCGGGA GCGGGGGCCT TGTTTATCAG TGGCGCCCTG GTTCTGTCCG AAAAGGTGGT TCACGCCCAC CACTGGTCGA CCGCGAAGTT TAGCGCCATC GCGGGCCTGT TACTCTTGAT GTTGGGCACT GGGATGATCG TCTTCGATCT GACCTCGTTC CAGTACGGCA TCTTCAATGG CGACATGAGT AAGCTGCTGC GCTTCTATCG CCTGTTTATG ACCTTCGAGC CCAGCTCCAT GATGAGCATA GGTACCTGGC TGCTGACCCT GGCGATCATC TTCGCGCTGC TGTTTTGCTT CTCCTTCAAG CGGCGTAATC AGGAGACCTT TACCAGCCGT GGCTATGCGC TGATCAATCT GATCCTCGCG ATCTGCGTCG CCTCCTATAC GGCACTGCTG ATCGGTGACA TCAAGCACAA CATAGTTTGG TCTAACAGCA TCTTGGTGGT GATCTTCCTA GTGTCTGCCA TCTCGTCAGG CGCCGCCGTG GTGCTGATCG TCAAGACCTG GCTAAAGCAG AGCGACCCAC ATCATCACTT CGCCAAGGCA GATTCCATGG TGATGCTCAT CGAGCTGTTT GTACTGGGTA TCTTCGTCTA CGCCATCGCC AATGTGAGCA AGTTCTATGG CCTGGATAAC CTGCTGGGGA TGGCGACATC GGCCGGTAAG ATCTGGTGGC TCGGCGCCGT AGTGGTTGGC CTGTTGCTGC CACTGCTACT CAACCTTACC TCTATCATGG GCAGAGTCGG CGTGTCTCAC GCTAAGGAGT ATGGTATCGC CGCACTCACC TTAGTCGGCG CCTTCTGCTT ACGTTATTCG GTGTTACTGG CCGGTCAGTC TTATTAG
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Protein sequence | MSEVHWGLLV AAYLFLAGAG AGALFISGAL VLSEKVVHAH HWSTAKFSAI AGLLLLMLGT GMIVFDLTSF QYGIFNGDMS KLLRFYRLFM TFEPSSMMSI GTWLLTLAII FALLFCFSFK RRNQETFTSR GYALINLILA ICVASYTALL IGDIKHNIVW SNSILVVIFL VSAISSGAAV VLIVKTWLKQ SDPHHHFAKA DSMVMLIELF VLGIFVYAIA NVSKFYGLDN LLGMATSAGK IWWLGAVVVG LLLPLLLNLT SIMGRVGVSH AKEYGIAALT LVGAFCLRYS VLLAGQSY
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