| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3235 |
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| Symbol | |
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| ID | 4921519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3861274 |
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| End bp | 3862770 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164845 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001095360 |
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| Protein GI | 127514163 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAGCA AATTCAATTT GGGCGCATTT ACCGGTAGAA CCGCTAAGCG GTTAATCTTA
TACATTATTT TATTCAGTGT GCTGATCACT ATCCTGTCGT CGGCGCTGCA GCTCTATGTG
GAATATCAAG ACGAGGTGGT CCAGATTGAG CAGCAGATCG AGCAGGTGCA AAATTCCCAC
CTCGACGGCA TCGCCCACTA CCTGGAGCAG AATAATCCCG CTCAGCTACA GCTGTTGATC
GACGGCCTGG TCAAGTTGCC GGATATCGAG CGCATCAGCA TCATAGCGCG GGATCGCGTG
TTACAGCGCA CCGGCGAGGT GATGTCCGAT AGGGTGATAG ATACCAAGTT CCTGCTCTAT
CCCACGAAAA GTGTAGACGC CAAGGAGCCG CTGGGCACAC TGCATCTGGT GGCAGGGCTA
GATCCCCTCT ATGAGCGCCT CAAACAGAAG ATCTGGTTTA TCCTGATCGC CACCGCGGTG
AAGACCTTTC TGATCGCCGC CTTTATCCTG CTGCTGTTCC AGTACCTGGT GACCCGCCAT
CTGAATAAGA TCAGCCAGTA CGCCCACACC TTAACCCTTA ACGGCCACGC GCCGGCCCTG
ACTCTGGACA GAATGCCTGC GCGCCGAGGT GAGGTGGATG AGTTAGATAC TGTGGTGACG
GCGCTCAACG AGATGCAGAC CAGGCTGGCG CAGGAGCTAA GGCTTAGGGA GGAGGCGGAA
TTTGACAGCC GCAGCAGCCG CGAGCAGCTG GCCCACATGG ACAGGGTCAC CAGCATGGAG
GAGATCGCCA GCAGCATCGC CCACGAGATC AACCAGCCGC TGACGGCCAT CGCCACCTAT
GCCCAGGCCG CGCTGCGCAC TAACAAGGGC GATGAGCGTG TGCCTGAGGC GCTGATTAAC
GCGCTGGAGA AGATCACCGA ACAGGCGCTG CGGGCCGGCG AGGTGATCCG CACCATACGT
CAGTTCATCA GCAAGCAGGC CAGCAGTCGC AGCGAGATTG GGGTCAAGGC GCTGCTGACC
AGCACCAGCC ATCTGCTGGA GACACTTGAG TCACAATATA AGGTCAGCCT GGTGCAAGGG
CTCGCCGACG AGCGGCTCAC GGTTATCGGC GATCTGGTGC AGCTACAGCA GGTGCTGTTT
AACCTGCTGC GCAACGCCAT GGAGGCCAGC CCGCCCGACA GCATTATCGA GATCTGGGTC
GAGGTGTGTG GCGATAAGGT AAGCTTACGC ATTCGCGATA GAGGCTGCGG CATAGACGCC
GAGGCGGCTA AGGAGATCTT TGCCCCCTTC TTTACCACTA AGCAGGAGGG GATGGGCATG
GGCCTGGCCA TCTGTAAGAC CATCATCGAT GCCCACAACG GCGAACTGCT CTTTAGTATC
AACGAGTTTG GCGGTTGTGA CTTCACCATG CTGCTGCCCC AGGGGGAGAA GTTGGTCGCT
GAGCCTGAAT CACAATCGGA AAACAAGCCG CAGAGCGAAC AGGGGCCGGT ATCATGA
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| Protein sequence | MISKFNLGAF TGRTAKRLIL YIILFSVLIT ILSSALQLYV EYQDEVVQIE QQIEQVQNSH
LDGIAHYLEQ NNPAQLQLLI DGLVKLPDIE RISIIARDRV LQRTGEVMSD RVIDTKFLLY
PTKSVDAKEP LGTLHLVAGL DPLYERLKQK IWFILIATAV KTFLIAAFIL LLFQYLVTRH
LNKISQYAHT LTLNGHAPAL TLDRMPARRG EVDELDTVVT ALNEMQTRLA QELRLREEAE
FDSRSSREQL AHMDRVTSME EIASSIAHEI NQPLTAIATY AQAALRTNKG DERVPEALIN
ALEKITEQAL RAGEVIRTIR QFISKQASSR SEIGVKALLT STSHLLETLE SQYKVSLVQG
LADERLTVIG DLVQLQQVLF NLLRNAMEAS PPDSIIEIWV EVCGDKVSLR IRDRGCGIDA
EAAKEIFAPF FTTKQEGMGM GLAICKTIID AHNGELLFSI NEFGGCDFTM LLPQGEKLVA
EPESQSENKP QSEQGPVS
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