| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3162 |
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| Symbol | |
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| ID | 4921939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3762993 |
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| End bp | 3766559 |
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| Gene Length | 3567 bp |
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| Protein Length | 1188 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164772 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095287 |
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| Protein GI | 127514090 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.11605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAAGA GCACTGTCGC CATCGCCATA TTGAGCGCGA TAGGATTAAG CGCCTGCGGC
ACAGACGAGC CGTATCAGGA GGTCAAGAAA GATGAGCGGA TGATCGCCGT CAAAGACTTC
AAAGATGCCA CCACCAGCGG CGCCGCGGGG GATCAACTTA CCTCCTCGAC CACCACCGGC
GAACTGGCCA GCAAGCAACC CGAGCGACTC TTTCTCTACA CCCGCAGCCT GGGTGAGGCA
CCCCGCTACT CGGCCCCCAT CCATGGTTTC TCTCAGGGAG AAGCCAAGCT GGTAACCCTG
CGGATGACGG AAAACGGCAT CCAGCTGCGT CAGATCGACA GAGACAACAT AGGTCTGGAC
CACGACTCGC GCTTCGATAA CGAGTACAAC AAGGCCCCTG TGCTGACCAT TCCCGGCGAC
TACATCGACT TCCAGTGCCA AGAGGACAAC TGGGGCGACT GTACCAACCG CGAAGAGGAA
GTCACAGATC GCAACATCAC CTGGGATCAG AAGAAGTTCT TCATTCCTAA GTTTGAAGGG
GCGCAGATCG CCGAGGAGAA CTACACGGAT CTGGTCACCT TCAAGCAGTG CACCACAGAG
ACAGAGTCGG CCCACCTAGT AAAAGATGGC AACTGGGAAG GCTATGAGAT GGACTTGGCC
AAGGGGGTGC TCAACTTCGA GATCGAGCAC ACCTATCAGG CCAATCCCGC CTGTTTCGGC
AAGTTCTTCA AGGGCAGCTT CGACAACCTC TCCTTCACCA CCACGGAATA TATCTCTGTC
GTGGCCCTAG ATCAGTTGGC CAGCAAGGAC TTTGTCACCA TCCCTTATAG TGAGGATGAG
AACGGCACCT TCGGCTTCTT CCGCACCCAG CATGAATACC GTGACGGCAA CAATGCCGAT
GGTAAAGATG GCTATGTGCG CCAGTACCTC AACCATTTCA ACCCCAAGAA GGAGGCGATC
ACCTACTTCT TGAGTAACAA CTTCTTCGAG CCGAAGAATC AGCCCTTCCT GGACGCGGCC
AAACAGAGCA TTACCGCCAT CAACATCCAG AACAAGCTGT TCGAAACCGG CCTGCCGGAG
CTCAAGCTGG CCCAGGCCAA CGAACGCAGA CACGGAGACT TGCGCTACAG CAACATCACC
CTGTTCGACG AACCGTTAGA TAACGGCCTG GCCGGTTATG GCCCCTCTGC CGCCAACCCG
CTCACCGGCG AGATCGTCAG CGGCCGGGTA GACCAATACA GCGCCAACCT GCAACAGGGC
TCGACCCGCT ACTACCGCAG GGTGCAGCTG GACTACAACC GCGGCATGCT AGACCCTAAC
TCGGTCAAAG ATCTTACCGG CGTTGACTAC ACCCCATCAC AGGAAGCGGT CGATCGCGCC
AATCAGGTAG CGGCCAACAA GCTCATTGCC GAGCAGAACA GTCAGAGCCA AGATCCTATG
GTGCAGCAAC CGCGCACCGA GGCCCAGCCC CAGACCATCA TCCCGGATCT CTCCACAGAT
GATGCCAGCA ACGCCCCCTT CGAGGAGCTG GTCAATCAGC AGAACAAGAC CGAAGCCTTC
TGGGCCGAGC ATAATCTGAT GAGTGTGGAT CAGGCCTTCG GCCTCACAGG CGGCGCCCTG
CGCGAACTGC CGCGCGGCAT TCAGGGTTAT GAGATTGACT GGAAAGACAC TCAGTTCTGG
GTCGATGGCA TCGTAGGCGG CAAGCTGAAG GATATCGAAG CCATGCCCAC CAGCTTCCAG
GCGGATCTGG TAACTAAGCT GGCAGCTCAG GCCTTTGCCG GTACCCTCAC CCATGAGCTG
GGCCACACCC TTGGCCTGAG ACACAACTTC GCCGGTAGCC GGGATCAAGC CAACTTCTTC
AACGAAGAGG AGATCGCCAA GTTCAGCCAG GCCTTCAGCG AGGCGGGTTA CCCGCATCTG
ACGGTCAAGG CCGATTTCTC CAGCCAGATG GACTATAACG CTGACCGTTT CGCCACCACC
TTCCAGAAAT ACGATCTGGC GGCGCTGCGC TTCGGCTATG GTCGTCAGGT AGAGACCCAA
GATGGCAGCC TGGTATCACT CGAAGCGGCC GATGCCAAGC GCCGCGAGGA GCTACGCCAG
GGTAATATCA CGGGCGAGAT CCAATATGGT GCCCTGCATC AGATAGGCAA AGAGCACGAC
CTGCGTTACT TCGCCTTCTG TACCGACGGC CATGTGACCC TCAACTCCAA CTGTAACCGC
TTCGACGCCG GCACCAACAA CGACGACATA GTGCAGTACT ATATCGACAG CTACCACGAC
AGCTATGACA CCATGAACGT GCGTCACAAC CGTCAGACCC TGTTCGAAGA TCATATCCTG
CCTTACACCA TCAATCGTCT GCGAGGCTTT AGCGACATAC GTCAGTTCGT CGAAGACACG
GCCACGGTTG AGGAGCTATT TGCCTTCGAT CAGAACGAGC TGGCCGAGAT CTGCCCAGGC
CATGAGAACT ACTGGTTCTG CGCCTCGCAA AGGGCGGTGG AAAAGGCGGC CGATACCTTC
CTTACCGCGG CCGGTCTGAG CGACATCTAC CTGCATGTCA CCTATCGCAT GAACAGCGAT
GACAGCCGCG CCCTGACCAA GGTGCACTCG CTGGAAGATA TTCTGACTCG CCTCTATCGT
CTCAATGCCG GCAAGCTGGA TGAAGGCTTC GAGCTGGGTC AGATCATCAC CGCCTACGAG
CAAGCCCCTG AAAAACTGAA AGAGCTGCTG CTCAAGGCCG ATATCGTCGA GGCCTACCAG
GACCTGCTCT ACGCCGATGT CAGCGCCAAC AAGGGACGCC TGCTCAACGG CGTCAAGGCC
CCGGCATCGA GCCCGAACCA TCCCTATGTC AACGAGCGTG ACGTACTGGG CATGTGGCCC
GATAAACTGC TGGCGATGCG TCAGCTGCTG ACCCGCAAGT CGCCTCGCAG CACCACGGGC
CGCACCTACT ACGCCCTGGC TGATTATCCT AAGGTGAAGG ATCAGCTCGA AGGCATGCTG
TGTCAGATGA CGCTGGGCAA CACGGTTCAG GAGATCAACC AGTACCTGAC CAAGCCTGTG
CTGAGCGACA GCTGTAAGGC AGTAGACGCC AAGTACTATG TCAACGACGT CGATTATGCC
GACCAGCATA TCGAGGCGCT TCCTAGCTAC GCAACCTCTC TGGGACGCTA CTTCGGCTTC
CCCCAGAGCA GCTATGAGAT GAAGGGTAAG AGCAACCTGC TGCAGATGAT GCTCAAGCAG
GTGGTGCTGG CATCACGCGA CAGCGACTAC CGCGGCGAAG AGAAGGCCAG AGTGTGGCGC
GAGTATGTGG GCATTCATCT TGCCAGCGAC GCCGTTGCCG CCAGCAAGCA GATCAGCCTG
CAGGGCAAAA ACTATGTGGC GACCGAAGAG AACCAGCTGG CTCTCATGCT GATCGACCAG
ATAGACACGC TCAAGGCACT CATCGCCAGC TCACCCGATC TGATGAAGCA TCAGATGAAC
AGCAAGGGTG AGACCTTCCA GCAATTGGTG GTCGACCCCA TCATCGCCCG CAATGAGCGA
GTGATCACTT ACCTGCCAGT GCTTTAA
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| Protein sequence | MYKSTVAIAI LSAIGLSACG TDEPYQEVKK DERMIAVKDF KDATTSGAAG DQLTSSTTTG
ELASKQPERL FLYTRSLGEA PRYSAPIHGF SQGEAKLVTL RMTENGIQLR QIDRDNIGLD
HDSRFDNEYN KAPVLTIPGD YIDFQCQEDN WGDCTNREEE VTDRNITWDQ KKFFIPKFEG
AQIAEENYTD LVTFKQCTTE TESAHLVKDG NWEGYEMDLA KGVLNFEIEH TYQANPACFG
KFFKGSFDNL SFTTTEYISV VALDQLASKD FVTIPYSEDE NGTFGFFRTQ HEYRDGNNAD
GKDGYVRQYL NHFNPKKEAI TYFLSNNFFE PKNQPFLDAA KQSITAINIQ NKLFETGLPE
LKLAQANERR HGDLRYSNIT LFDEPLDNGL AGYGPSAANP LTGEIVSGRV DQYSANLQQG
STRYYRRVQL DYNRGMLDPN SVKDLTGVDY TPSQEAVDRA NQVAANKLIA EQNSQSQDPM
VQQPRTEAQP QTIIPDLSTD DASNAPFEEL VNQQNKTEAF WAEHNLMSVD QAFGLTGGAL
RELPRGIQGY EIDWKDTQFW VDGIVGGKLK DIEAMPTSFQ ADLVTKLAAQ AFAGTLTHEL
GHTLGLRHNF AGSRDQANFF NEEEIAKFSQ AFSEAGYPHL TVKADFSSQM DYNADRFATT
FQKYDLAALR FGYGRQVETQ DGSLVSLEAA DAKRREELRQ GNITGEIQYG ALHQIGKEHD
LRYFAFCTDG HVTLNSNCNR FDAGTNNDDI VQYYIDSYHD SYDTMNVRHN RQTLFEDHIL
PYTINRLRGF SDIRQFVEDT ATVEELFAFD QNELAEICPG HENYWFCASQ RAVEKAADTF
LTAAGLSDIY LHVTYRMNSD DSRALTKVHS LEDILTRLYR LNAGKLDEGF ELGQIITAYE
QAPEKLKELL LKADIVEAYQ DLLYADVSAN KGRLLNGVKA PASSPNHPYV NERDVLGMWP
DKLLAMRQLL TRKSPRSTTG RTYYALADYP KVKDQLEGML CQMTLGNTVQ EINQYLTKPV
LSDSCKAVDA KYYVNDVDYA DQHIEALPSY ATSLGRYFGF PQSSYEMKGK SNLLQMMLKQ
VVLASRDSDY RGEEKARVWR EYVGIHLASD AVAASKQISL QGKNYVATEE NQLALMLIDQ
IDTLKALIAS SPDLMKHQMN SKGETFQQLV VDPIIARNER VITYLPVL
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