5 homologs were found in PanDaTox collection
for query gene Shew_3162 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004347  SO_0404  hypothetical protein  54.77 
 
 
1152 aa  1304    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_3162  hypothetical protein  100 
 
 
1188 aa  2481    Shewanella loihica PV-4  Bacteria  normal  0.11605  normal 
 
 
-
 
NC_009665  Shew185_3954  hypothetical protein  54.19 
 
 
1152 aa  1294    Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2009  hypothetical protein  52.96 
 
 
1154 aa  1274    Shewanella sediminis HAW-EB3  Bacteria  normal  0.404809  normal  0.0304235 
 
 
-
 
NC_013457  VEA_000788  MoxR-like ATPase  27 
 
 
1372 aa  356  1e-96  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
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