Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3136 |
Symbol | |
ID | 4922003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 3729217 |
End bp | 3732021 |
Gene Length | 2805 bp |
Protein Length | 934 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640164746 |
Product | FAD linked oxidase domain-containing protein |
Protein accession | YP_001095261 |
Protein GI | 127514064 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.502756 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATTA ATTATTCAGC AGTAGTCGCA GATTTACGCG CCAAACTCGG TGATGAAGCC GTCTCAGACG ATGCAGTGCG TCGTTTCGCC TGGTCCACCG ACGCCAGTTA TTTCCGTATC GTGCCAGAGG TGGTGGTACA CGCCGAGACT CTGGAAGATG CCCGTGACAC ACTCGAAGTC GCGCGCCAGC ACAATGCTCC AGTGACCTTC CGCGCCGCCG GCACCAGTCT CTCAGGCCAG GCCATCGGCG AAGGTATCTT GTTGATCCTA GGTCACGACG GCTTCAGAAA GATCGCCGTC AGCGAGGATC ACAACCAGAT CTCACTCGGC GCGGCCGTTA TCGGTGGCGA CGCCAACCTG GCGCTTAAGC CATTCAACAA GAAGATTGGC CCGGATCCGG CCACCCTGGC CTCGGCCATG GTAGGCGGTA TCGTCTCTAA CAATGCCTCG GGCATGTGCT GTGGCACGGC CCAGAACAGC TACCAGACCA TAGCCTCGGC CAAGCTACTC TTCGCCGACG GTACCCGTCT GGACACAGGC TGTGAGCGCT CAAAAGAAGC GTTTCGCGAG TCTCACCAGC AGCTGCTTAG CGAACTGACC GATCTCGCCA AGCTCACCGC CAGCAACCCG GTACTGGCCG ATCGCATTCG CAAGAAATAC TCCATCAAGA ACACCACAGG CTACAGCATT AACGCCCTGG TGGACTTCGA GGATCCGTTC GAGCTGATCA ACCACCTGAT CGTCGGCGCC GAGGGCACCC TGGCCTTCGT CGAAGAGGTC ACCTACAACA CGGTCGATGA GGCCAAGTTC AAGGCCTCGG CCATGGCGGT ATTCTTCAAC ATGGAAGATG CGGCCCGCGC CATTCCGCCA ATCAAATGCG ACAGCGTCGC GGCCGCCGAG CTGCTGGACT GGGCGTCGAT CAAGGCGGTC ACTGGCAAGA AGGGGATGCC AGACTGGCTG AGCGAGCTGC CAGAAGGCGC CGCCATCCTG CTTATCGAAT CCCGAGCCAA CGACGAGGCG ACCCTGGATG CCTACACCCA GGATGTGATC GCCAAGCTGG CCCATATCGA AACCGAGCGT CCTATCAGCT TCAGCCGTGA CCCCGAGGTC TACAGCAAGT ACTGGGCGAT GCGCTCTGGC CTCTTCCCTA TCATAGGCGG CGAGCGTCCG AAGGGCACCT CGGTGATCAT CGAAGACGTG GCCTTCGAGC TGGAACACCT GGCCAATGCA GCCACAGATT TGACCGCCCT GTTCCACAAG CATGGCTACC CTGAAGGGGT GATCTACGGC CATGCGCTGG CGGGTAACTT CCACTTCATC ATCACGCCGA CCTTTGCCTC ACAGGAAGAT ATCGATCGCT TCCACGGCTT CATGCAAGAC GTGGCCGAGA TGGTGATCAA CAAGTATGAC GGCTCCATGA AAGCCGAGCA CGGCACAGGC CGCGCGGTAG CACCATTCGT CGAGATGGAA TGGGGCGCCG ATGCCTACAC CCTGATGAAG CGCATCAAGC AGATCTTCGA TCCCCAAGGC CTGCTAAACC CTGGGGTGAT CCTCAACGAC GACGCCAACG TGCACGTCAA GAACATCAAG CCATGCCCTG TGGTCGACGA CTTTGTGGAC AGATGTATCG AGTGTGGCTT CTGTGAGAAG ACCTGTCCGA CCTCGGCGCT TAACTTCACT CCGCGTCAGC GTATCGCCAC TCTGCGTGAA ATCGCCCGCC TGGAGGCCTC TGGCGACAAA CAGGCCGCCG AAGAGATGCG CGCCGCCGCC AAGTATGACG TGGTCGACAC CTGCGCCGCC TGTCAGCTCT GTACCATCGC CTGTCCGGTA GACAACAGCA TGGGTCAGCT GGTGCGTAAG CTGAGAACCC CATACATCAC CACGACCGAA CAGAAGGTGC TGGACTTCCA GGCCAAACAC TTCGGCGCCG TCAACCAGGT GATCAGCACA GGTTTCGACG TGCTCAGCAT CATCCACAAG GTCACAGGCG ACAGCGTCAC CAACGGCCTG ATGAAGGTGG GCCGAATGGT GTCCAAAGAG GTGCCTTACT GGAACCCAGA TTTCGCCAAG GGCGGCAAGC TGCCTAAGCC AAGCCCAGCC TCGCCAGACA AGGAGACTGT GGTCTACTTC CCGGCCTGTG GTGGTCGCAC CTTCGGCCCG ACCCCGAAAG ATCCCGACAA CCGCACCCTG CCAGAAGTCG TAGTCACCCT GCTGGAGCGC GCCGGTTACA ACGTGGTCAC CCCAGACAAC ACCCGTCACC TGTGCTGCGG CCAGATGTGG GAATCTAAGG GTGACTTCAA GAACGCCGAC GCCAAGCGTG ACGAGCTGAT CGATGCCCTG AGCGCCCTGA GTGACAACGG CAAGGTGCCT GTGGTGGTGG ATGCACTCTC CTGTACCTAC CGTACCCTGA CAGGCAACCC TAAGGTGGAA ATTACCGATC TGGTCGAGTT CATGCATGAC AAGATCTTGC CTAAGCTGAC CTTTACCAAG AAGGTCAACG TGGCACTGCA CCTTGGCTGT AGCGCCCGCA AGATGAAGCT TGAGCCTAAG ATGCAGGCCC TGGCCGATGC CTGTAGTAAC GGCGTTAAGC TGCCAGAGGG GATCGAGTGT TGTGGTTACG CCGGCGAGAA GGGCTTGTAC AAGCCTGAGA TCAACGCCAG CGCCCTGCGC AACATCAAGA AGCTGATCCC GGTCGATATC AAGGAGGGCT ACTACGCCAA CCGCATGTGT GAAGTGGGTC TGACCCAGCA CAGCGGCATC TCCTATCGCC ACCTGGCCTA TCTGCTGGAA GAATGCAGCC GCTAG
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Protein sequence | MSINYSAVVA DLRAKLGDEA VSDDAVRRFA WSTDASYFRI VPEVVVHAET LEDARDTLEV ARQHNAPVTF RAAGTSLSGQ AIGEGILLIL GHDGFRKIAV SEDHNQISLG AAVIGGDANL ALKPFNKKIG PDPATLASAM VGGIVSNNAS GMCCGTAQNS YQTIASAKLL FADGTRLDTG CERSKEAFRE SHQQLLSELT DLAKLTASNP VLADRIRKKY SIKNTTGYSI NALVDFEDPF ELINHLIVGA EGTLAFVEEV TYNTVDEAKF KASAMAVFFN MEDAARAIPP IKCDSVAAAE LLDWASIKAV TGKKGMPDWL SELPEGAAIL LIESRANDEA TLDAYTQDVI AKLAHIETER PISFSRDPEV YSKYWAMRSG LFPIIGGERP KGTSVIIEDV AFELEHLANA ATDLTALFHK HGYPEGVIYG HALAGNFHFI ITPTFASQED IDRFHGFMQD VAEMVINKYD GSMKAEHGTG RAVAPFVEME WGADAYTLMK RIKQIFDPQG LLNPGVILND DANVHVKNIK PCPVVDDFVD RCIECGFCEK TCPTSALNFT PRQRIATLRE IARLEASGDK QAAEEMRAAA KYDVVDTCAA CQLCTIACPV DNSMGQLVRK LRTPYITTTE QKVLDFQAKH FGAVNQVIST GFDVLSIIHK VTGDSVTNGL MKVGRMVSKE VPYWNPDFAK GGKLPKPSPA SPDKETVVYF PACGGRTFGP TPKDPDNRTL PEVVVTLLER AGYNVVTPDN TRHLCCGQMW ESKGDFKNAD AKRDELIDAL SALSDNGKVP VVVDALSCTY RTLTGNPKVE ITDLVEFMHD KILPKLTFTK KVNVALHLGC SARKMKLEPK MQALADACSN GVKLPEGIEC CGYAGEKGLY KPEINASALR NIKKLIPVDI KEGYYANRMC EVGLTQHSGI SYRHLAYLLE ECSR
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