| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3094 |
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| Symbol | |
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| ID | 4922258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3674543 |
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| End bp | 3675304 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640164704 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095219 |
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| Protein GI | 127514022 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0730] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATCA CCCTCACCCA CGGCCTGTTA CTGGTCGTCA CCGGCTTTCT GGCTGGCATA
ATCAATACCC TGGCCGGCGG CGGCTCCAAC CTCACCCTGC CCGCACTCAT GGTGATGGGC
TTGCCCGCCG AGGTCGCCAA CGCTACCAAC CGGGTCGGGG TCACGGTGCA ATCGATCACC
GCCCTGTTAG GCTTTCACAA GCATGGCAAG TTAGATACCC AGGACAAGGG GCCGATACTG
CTGCCCACTA TACTTGGCGG CTTTATAGGC GCGGGCCTGG CCGCCTACGC CCCCAGCACA
CTGATTAAAC CCCTGCTGCT AGGCACCATG CTGCTGATGG CGCTCATCAT CTTAGTGCGC
CCCGCCATCA TAGCGCCCGA GCTGGGCACG CCGGTCAACC GGGTCAAGAA CACGCCCAGC
TCCTGGTTCT GGCTGACTCT GGCCGGGATC TATGGCGGCT TCGTGCAGGC GGGGGTAGGC
TTCGTCTTGC TGGCGGCCCT GGCGGGCAGC CTGAGATATG ATCTGGTGAG GGCCAACGCC
CTCAAGGTGT TCTGTACGCT GTTCTTTACC CTGGCTTCCC TGCTGGTCTT CATCAAGGAA
GATCTGATCC TCTGGCTGCC AGGGCTCATC CTAGCAGCAG GCACCATGGT GGGCGCCCAT
CTGGCGGTCA AGCTGGCAAT CAAGGTTAGC CCCAAGGTAC TCAAGTGGTT TCTGTTTTTG
ATGACACTCT GCGGCAGCGT CGCCGCTATG CTTAGTGACT AA
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| Protein sequence | MEITLTHGLL LVVTGFLAGI INTLAGGGSN LTLPALMVMG LPAEVANATN RVGVTVQSIT
ALLGFHKHGK LDTQDKGPIL LPTILGGFIG AGLAAYAPST LIKPLLLGTM LLMALIILVR
PAIIAPELGT PVNRVKNTPS SWFWLTLAGI YGGFVQAGVG FVLLAALAGS LRYDLVRANA
LKVFCTLFFT LASLLVFIKE DLILWLPGLI LAAGTMVGAH LAVKLAIKVS PKVLKWFLFL
MTLCGSVAAM LSD
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