| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3033 |
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| Symbol | |
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| ID | 4923014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3601926 |
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| End bp | 3604112 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640164643 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095158 |
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| Protein GI | 127513961 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1944] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00702] uncharacterized domain
[TIGR03549] conserved hypothetical protein TIGR03549 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.431186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATCA AAGTTAATTT TCTCGATAAC CTCAGACTCG AAGCCAAATT CGACGATTTT
ACCGTCACCG CCGATCAGCC GATCCGCTAC AAGGGTGATG GCTCGGCGCC TAGCCCCTTT
GATTATTTCC TGGCGTCGTC GGCTCTGTGT GCGGCCTATT TCGTAAAGGT CTACTGTAAG
GCGCGCGATA TCTCGACCGA CAATATTCGT CTGTCTCAGA ACAACATTGT CGACCCGGAA
GATCGCTATA ACCAGATCTT CCAGATCCAG GTCGAGCTGC CCGACGATAT TTCCGACAAA
GATCGCGAGG GGATCCTGCG CTCCATCGAC CGTTGTACCG TGAAGAAGGT GGTGCAGACA
GGCCCAGAAT TTAAGATTGA GACGGTAGAA AACCTGGACG CCGATGCCAA CGCCATGTTG
ATGGGTCAGC CTGAAGGTGA CAGCAGCACC TATATTCTGG GTAAAGATCT GCCGCTTGAG
CAGACCATCG CCAACATGAC GGAGATCCTG GCTGGACTCG GGATGAAGAT AGAGATCTCC
TCCTGGCGTA ACATAGTGCC CAACGTCTGG TCGCTGCATA TTCGTGATGC GGCCTCGCCC
ATGTGCTTCA CCAATGGTAA AGGCGCGAGC AAGGAGAGTG CCCTCTGTTC GGCCCTGGGC
GAGTTTATCG AGCGTCTGAA CTGCAACTTC TTCTACAACG ATCAGTTCTT CGGCCTGGAT
ATCGCAAACA GCGAGTTTGT GCACTACCCC AACGAGAAGT GGTTCGCCCT CACCGATGAT
GACTCGCTGC CTGAAGGCAT GCTGGACGAT TACAGCCTGG AGATCTATAA CCCGGATGGC
GAGCTTTGCG GCTCGCACCT GATCGATACC AACTCGGGCA ATATTGAGCG CGGTATCTGT
ACCATCCCCT ACAAGCGCCG CTCGGACGGT GAGACCGTCT ATTTCCCATC GAACTTGATC
GAGAACCTGT TCCTCAGTAA CGGCATGAGT GCGGGCAACA ACCTGCAGGA GGCCGAGGTA
CAGTGTTTGT CGGAGATCTT CGAGCGCGCG GTGAAGCGTC AGATTATCGA GCAGGAGATA
GTGCTGCCGG ACGTGCCTAT GGCCGTGCTG GAGAAGTACC CTAGCATTCT TGCCGGTATC
AAGGGACTCG AGGAGCAAGG CTTCCCAGTA GTCGTGAGAG ACGCCTCCCT CGGCGGTCAA
TTCCCCGTGA TGTGTGTGAC CCTGATGAAC CCTAAGACAG GCGGCGTGTT CGCCTCCTTC
GGTGCGCACC CAAGCTTCGA GGTGGCGCTG GAGCGCAGCC TGACCGAGCT TTTGCAGGGC
CGCAGCTTCG AGGGACTTAA CGATGTGCCT AAGCCGACCT TTAACAGTAT GGCGGTAAGC
GAGCCAGAGA ACTTCGTCGA GCACTTTATC GACTCGACCG GGGTGATCTC CTGGCGCTTC
TTCAGCAACA AGGCGGACTA TGCGTTCTGC GAGTGGGACT TCTCCGGCAC CAACGAGGAG
GAGGCCAAGG GGCTGTTCGG CATCTTGGAG AGCCTGGGCA AGGAGGTCTA TGTCGCCGAG
TTTGAAGAGC TTGGCGCGTC TGCCTGTCGC ATCCTGGTGC CTGATTACTC TGAGGTTTAT
CCTGTGGACG ACCTCATCTG GGACAACACC AACAAGGCGC TGGACTATCG TGAAGATATC
CTCAACCTGC ACAGGCTGAG CGATGATGAG CTTGCCGATC TGGTCAATCG TCTGGAAGAG
AGTCAGCTGG ATAACTACAC GGATATCCGC ACCCTGATCG GCATCGTCTT CGACGAAAAC
ACCGTGTGGG GACAGCTGAC CATTATCGAG CTGAAGATCC TCATCTATCT GGCCCTGGGC
GCTCACGAAG AGGCGCTTGA GCTGGTGGAA GACTTCCTGC AGTTCAACGA CAACACGGTT
CAGCGCGGTC TCTTCTACCA GGCGATGAGC GCGGTGCTCG AGGTGACTCT GGATGAGGAG
CTCGAGCTTG AGGACTTTAT CGGTAACTTT ACCCGCATGT TTGGTGAAGA GGTGATGGCT
CAGGTGGTTG GTTCGGTGAA CGGCGAGGTG CGTTTCTCAG GCCTTACCGA GACCAGCATG
GCGCTTGAAG GCATAGAGCC GCATCTGCGT CTTATCGAGA GCTACAAGAA GTTGCATCAG
GCCCGTAAAA TTAAAGCCGG ACTTTAA
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| Protein sequence | MEIKVNFLDN LRLEAKFDDF TVTADQPIRY KGDGSAPSPF DYFLASSALC AAYFVKVYCK
ARDISTDNIR LSQNNIVDPE DRYNQIFQIQ VELPDDISDK DREGILRSID RCTVKKVVQT
GPEFKIETVE NLDADANAML MGQPEGDSST YILGKDLPLE QTIANMTEIL AGLGMKIEIS
SWRNIVPNVW SLHIRDAASP MCFTNGKGAS KESALCSALG EFIERLNCNF FYNDQFFGLD
IANSEFVHYP NEKWFALTDD DSLPEGMLDD YSLEIYNPDG ELCGSHLIDT NSGNIERGIC
TIPYKRRSDG ETVYFPSNLI ENLFLSNGMS AGNNLQEAEV QCLSEIFERA VKRQIIEQEI
VLPDVPMAVL EKYPSILAGI KGLEEQGFPV VVRDASLGGQ FPVMCVTLMN PKTGGVFASF
GAHPSFEVAL ERSLTELLQG RSFEGLNDVP KPTFNSMAVS EPENFVEHFI DSTGVISWRF
FSNKADYAFC EWDFSGTNEE EAKGLFGILE SLGKEVYVAE FEELGASACR ILVPDYSEVY
PVDDLIWDNT NKALDYREDI LNLHRLSDDE LADLVNRLEE SQLDNYTDIR TLIGIVFDEN
TVWGQLTIIE LKILIYLALG AHEEALELVE DFLQFNDNTV QRGLFYQAMS AVLEVTLDEE
LELEDFIGNF TRMFGEEVMA QVVGSVNGEV RFSGLTETSM ALEGIEPHLR LIESYKKLHQ
ARKIKAGL
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