Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2983 |
Symbol | |
ID | 4923824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3539414 |
End bp | 3540067 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640164593 |
Product | Tat pathway signal sequence domain-containing protein |
Protein accession | YP_001095108 |
Protein GI | 127513911 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATGGG CAATAAAACA GACAGATCTA GTGAGCAAAC GGGAGATTAA GTTGGCGAGG AGTAGGCGCG AAGCAAATAG ACAGTATGCC TTCGAAAGCG GCCTGACCCG GCGCGACTTT CTTGTGCGCA GCGGCGCCCT GGGCCTGCTG CTGGCGGCGA AGCCTGAGTT GAGCCTTGCC GGCGACGAAG GCTTTTCTCT CACCACACGA CCCAAAGATT TCGACGTGAT CAACCGCGCC GTCATAGAGA GCGTGCAGCT GCACCTGTTT CCCGACGATG GTGATGGCCC TTCGGCTAAG GAGCTGAACG CCTACCGCTA TCTGCTGTGG GCCATGGAAG ATCCTGACAA TCGCGCCGAT GAGGACAGGC TGTTCATCTT GCAGGGGGCG GCCTGGTTGG AAGATTGGGC CGATACCCAG ACAGGACGCA GCTTCCTGGT GCTGAACTGG GATGAGCAGG AGGCATTGCT AAAGGCGATC GCCAAGAGCC GCGCAGGTGA AAACTGGCTT TCCCTGCTGC TCTATTACCT GATTGAGGCA TTAATGTTAG ATCCACTCTA CGGCGGTAAC CCGGATGAGA TTGGCTGGCG TTGGCTCGAG CATCAGCCAG GCTTTCCACG GCCCGTGACG GGTAAGAGTT ATCTGGATTT TTAA
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Protein sequence | MSWAIKQTDL VSKREIKLAR SRREANRQYA FESGLTRRDF LVRSGALGLL LAAKPELSLA GDEGFSLTTR PKDFDVINRA VIESVQLHLF PDDGDGPSAK ELNAYRYLLW AMEDPDNRAD EDRLFILQGA AWLEDWADTQ TGRSFLVLNW DEQEALLKAI AKSRAGENWL SLLLYYLIEA LMLDPLYGGN PDEIGWRWLE HQPGFPRPVT GKSYLDF
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