Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2905 |
Symbol | |
ID | 4921366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3444564 |
End bp | 3445841 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640164502 |
Product | hypothetical protein |
Protein accession | YP_001095030 |
Protein GI | 127513833 |
COG category | [S] Function unknown |
COG ID | [COG5505] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.9097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGTA CCGCGTTAGT CAGCAATGAC GCCACGGCAT TAGTCACCAA TGATGCCACG GGCCTGGGCC TGTTGGCGGT GATCTTAGGA TTCGTGTTTT ATACCAATAG CAGCCAGCAC CCATTCTGGG TGAAGTTTTA TCGTTTCATT CCTGCGCTGC TGCTGTGCTA CTTTCTGCCT TCGCTGCTAA ACTCCTTTAA TATCCTGGAT GGCGATACCT CAAACCTCTA TTTTGTCGCC TCCCGTTACC TGTTACCCGC CTGTCTGGTG CTGCTGATCT TAAGTGTCGA CCTCAAGGCG ATCCTAAGCC TTGGCCCCAA GGCGATTGTG ATGTTTTTAA CCGGTACCGT CGGCATAGTG ATAGGGGGGC CAATTGCCTT ACTTATCGTG TCGACCCTCA ACCCTGAGAT CCTCGGGGTG AGCGGGCCAG ATGCGGTCTG GCGCGGCATG ACTACCCTGG CCGGCAGCTG GATCGGCGGC GGCGCCAACC AGGCGGCGAT GAAGGAGATC TACGAGGCCG GTGGCAACAT CTTCTCTATC ATGGTGACGG TCGATGTGAT CGTGGCCAAC ATCTGGATGG CCGTGCTGCT GTTTATGGCC TCTAAGGCCA AGGAGATCGA TGCCAAGACG GGCGCCGATA CCCGCGCCAT CGAGACCCTC AAGCAGAAGG TGGAGAAGTA TCACGCCGAA AACGCCCGTA TCGCCAGCTT GCGAGATCTA ATGATGATAG TCGCCGTGGG CTTTGGTATC ACGGGCCTGG CCCATGTGAT CGCCGATTTC CTCGGGCCCT TCTTCGAGGC CAACTATCCC TGGACTCGCG ATTACAGCCT GACCTCTAAG TTCTTCTGGC TGATCGTGAC GGTAACCACC ATAGGTCTGG CCATGTCCTT TACCCCTGTG CGCCATCTTG AGGCGGCGGG CGCCTCTAAG GTCGCCTCGG CGTTCCTCTA TATCCTGGTG GCGACTATCG GCCTGCATAT GGATGTGTTC AAACTGTTTG ACCCGGCCAA CCTCTGGTAT TTCGCCATCG GCATCATCTG GATGATAGTC CACGCCGGTT TCATGTTGCT GGTGGCCAAG CTTATCCGCG CGCCACTGTT TTACATGGCG GTGGGCAGTC AGGCCAACGT CGGCGGTGCG GCCTCGGCGC CCGTGGTGGC CGCGGCCTTC CATCCGGCCC TGGCACCTGT CGGTGTACTC CTGGCCGTAT TAGGCTATGC TGTAGGCACC TATATGGCGT GGGTGTGTGG TCAGATACTG CAGGTCGTGG CTCAGTGA
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Protein sequence | MSSTALVSND ATALVTNDAT GLGLLAVILG FVFYTNSSQH PFWVKFYRFI PALLLCYFLP SLLNSFNILD GDTSNLYFVA SRYLLPACLV LLILSVDLKA ILSLGPKAIV MFLTGTVGIV IGGPIALLIV STLNPEILGV SGPDAVWRGM TTLAGSWIGG GANQAAMKEI YEAGGNIFSI MVTVDVIVAN IWMAVLLFMA SKAKEIDAKT GADTRAIETL KQKVEKYHAE NARIASLRDL MMIVAVGFGI TGLAHVIADF LGPFFEANYP WTRDYSLTSK FFWLIVTVTT IGLAMSFTPV RHLEAAGASK VASAFLYILV ATIGLHMDVF KLFDPANLWY FAIGIIWMIV HAGFMLLVAK LIRAPLFYMA VGSQANVGGA ASAPVVAAAF HPALAPVGVL LAVLGYAVGT YMAWVCGQIL QVVAQ
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