| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2685 |
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| Symbol | |
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| ID | 4923194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3178527 |
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| End bp | 3179114 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640164280 |
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| Product | putative lipoprotein |
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| Protein accession | YP_001094810 |
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| Protein GI | 127513613 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.29359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTACAA TTTCGACAAG AAAAACACTT TTGGCTTTTA TCGGGGTAAC ACTTGTTGCT
GGCTGCGCTA CAGGCAATAC GCCCGAGGCG AAGAAGGCCA ATGCTCGTCA GGAGACCCAG
GAGGCGTTGA CAAGTATCTA CGCAAAGCAT CCGGGGGCTA AGCGCGCGGT GGCGAACTCG
GTTGCTCACG TAGTCTGTAC CGGCAGCAAC AGTTATCTGT TTGCGCTATC TACGGGGGGC
GGCATCTGTG TTCTGAGCGA AGGCGGAAAG AACAGCTACT ATCGTTTTGC GACAGGCGGC
GTTGGTGCCG GGATCGGCTG GAAACAGGTG GCCTTCGTGC AGGCCTTCAT GAAGCCTGAT
GCGCTGAAAA GATTTAAGGA CTCAGGCTAT GAGGGCCAGG CTCAGGCGGA GGCCAGTGCC
AAATATGAGG AGAGTGGCGA TCAGGTATCG GCCAATCAGT CGGTGGATCT CGACGGCGTA
AAAACCTATC AGGTTAACTT GATGGGGGCG GCGGCGCAGG CGACCGTACA AGGCTATAAG
TACTGGCCGA CCGACTTCAG CGAAGATTTC ATGCAAAACC GGCAGTGA
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| Protein sequence | MFTISTRKTL LAFIGVTLVA GCATGNTPEA KKANARQETQ EALTSIYAKH PGAKRAVANS
VAHVVCTGSN SYLFALSTGG GICVLSEGGK NSYYRFATGG VGAGIGWKQV AFVQAFMKPD
ALKRFKDSGY EGQAQAEASA KYEESGDQVS ANQSVDLDGV KTYQVNLMGA AAQATVQGYK
YWPTDFSEDF MQNRQ
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