| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2615 |
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| Symbol | |
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| ID | 4920714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3085347 |
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| End bp | 3086471 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164209 |
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| Product | patatin |
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| Protein accession | YP_001094740 |
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| Protein GI | 127513543 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCAGATA AGACAGCGTT GGTGTTAGGG GGCGGCGGTG CGCGCGCCGC TTACCAGGTC
GGGGTACTCA AGGCGATAGT ACAGTTCTAT CCCCGTAACC ACGGCGTGCC CTTTAAGATC
ATCTGCGGCA CCTCTGCGGG CGCCATCAAC GGCACCTCTA TCGCGACCCA TGCCTCCTGT
TTTCATCTCG GGGTACGTAA GCTCGAGTGG GTCTGGCGCC ACTTTAGCAC TCACAAGGTC
TACCGCTCCT CTTTTGGCGG CATCTTTTCC CACTTGGCGC AGATGGCGCT GATGGGGCTA
CAGGATGTGA AGATCAACAC CGAAGCCGGC AGCCTGTTCG ACAACCAGCC CCTGAGAAAC
CTGCTCAACA ACCTGATTAA CTTCGAGCGG ATCGACCGCA ACATCGCCAA CGGCGCCCTG
CATGCCCTGA GCGTAGATAC CTCCTGCTAC AACTCGTCGC GCTCGGTGAG CTTCTTTCAG
GCCGCCAAGG AGATTGATGA GTGGAACCGC GCCCGCCGTG GCGGCCAGCG CACTCATCTT
CATACCGAAC ACCTGCTGGC CAGCGCCGCC ATCCCCCTGG TGTTTCCCTC GGTGAAGCTC
AATCGTGGCT ATTATGGTGA CGGCTCTGTG CATCAGCTTG CGCCCCTGAG CAGCCCGATT
CATCTGGGGG CGGAGAAGAT CATGGTGATC AACCTGGAGA GCCCCCATAA GCAGGTGCAC
AAGGAGTTTG AGCACCACCC CAAGACGGCG ACCATAGCCG GTCACCTGCT CGATACCATC
TTCTCCGATA CGTTAAACAG CGATCTCGAG CGTCTGCAGC GGATCAACAG CACACTCAAT
CTGATCCCCA AGGAGCGCAG ACATGAGGCG TCGCTAAAGA CCATAGATAC TCTGGTGATA
AAACCCAGCG AGGATCTGAG TCTCATCGCC GCCCAGCACT ATCAGGATAT GCCGATGGCG
GTGAAGGCCC TGCTACGGCT AATCGGCATC AACCAGCAAT CTGACTCGAG TATCGTCTCT
TACCTGCTGT TCGAGCAGTC GTACTGCAGC GCGCTGATCA ACCTGGGTTA TCAGGATGCC
ATGTGCCAGA TAGATGAGAT CAAGGCCTTC TTCAATATTC GCTAA
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| Protein sequence | MPDKTALVLG GGGARAAYQV GVLKAIVQFY PRNHGVPFKI ICGTSAGAIN GTSIATHASC
FHLGVRKLEW VWRHFSTHKV YRSSFGGIFS HLAQMALMGL QDVKINTEAG SLFDNQPLRN
LLNNLINFER IDRNIANGAL HALSVDTSCY NSSRSVSFFQ AAKEIDEWNR ARRGGQRTHL
HTEHLLASAA IPLVFPSVKL NRGYYGDGSV HQLAPLSSPI HLGAEKIMVI NLESPHKQVH
KEFEHHPKTA TIAGHLLDTI FSDTLNSDLE RLQRINSTLN LIPKERRHEA SLKTIDTLVI
KPSEDLSLIA AQHYQDMPMA VKALLRLIGI NQQSDSSIVS YLLFEQSYCS ALINLGYQDA
MCQIDEIKAF FNIR
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