Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2577 |
Symbol | |
ID | 4921065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3036686 |
End bp | 3038260 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640164171 |
Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
Protein accession | YP_001094702 |
Protein GI | 127513505 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAAACA ATCAACCCGT GATAGACAAC GAGGTCGTGC TGACCGACGA TGATATTCTG CTGTCCACGA CGGATCTCAA GGGCAATATA GGTTATGCCA ATGAGGATTT TTGCCGTATC TGTGGGTTTT CCGAGGAGGA ACTGGTTCGC CAGCCCCATA ACATTGTGCG CCATCCCGAC ATGCCCAAGG CCGCCTTTGC CATCTTGTGG CAGCGTCTGG CGCAGAAGCA ATCCTGGCTG GGGGTGGTGA AGAATCGCTG TAAAGATGGC TCCTACTACT GGGTCAATGC CTATGTGGCG CCCGTGATGG AGAATGGTCA GGTCAAGGAG TATCAATCGG TGCGCCGCCG GGCGAGCCAG GCCCAGGTAG AGCGTGCCAG CGATATCTAT CAGAGCCTTA ATAAGTCTGA GCAGCGCAGC GAGATCAAGG ATGCCAAGCT CGGTTACGGC GGCAAGCTGA CCCTGTTTGC TGTTCTCTGT TTGTTGCTGG CCATCGGCCT GAGTAATATC TCGCCCTGGT TGGCACTCAT CTGCGCGCCT CTGTTGGCGA TTGGCATGAG GCTCCTCCTA GCACCGTTAC GGGCGCTGAA TGACCAAGCG CTCACTATCG TATCAGACCC GGTTGCCAGA CACATCTATG CCGGGCGGCG GGACGAGCTG GGCAACATTC AATTTGCCAT GGAGTTCACT ACGGCGGAGA TCGCCGGGGT AGTAGGGCGG ATGACAGATG CCTCAAGCGT CATCGCCAGA GACAGCGACG CCTTGCTTGG CTCTATCACG GCCACGGCGG ATCGCGCCGA TGGTCAGAAT CAACAGACGG CCCAGGCCGC GGCGGCTGTG GAGGAGCTGA CCGCCAGCTT TAACGAGCTG GGTCAGCAGC TTAAGCAGGT GTCGGCGGAT GTCGAGGCCA GCCAGGCGGC TGTGCTGCAG GGCTATGAGC AGCTCGATGC CGTGGTGGCC AGCATAGATG AGCTTCATAA CGAAGTGGGC AACTTTGCCC AGGTGGTCAG CGAGATAGAG CATGACAGCG TGGCCATCAA TCAGGTGCTT GAGGTGATCA CTAAGATTGC CGAGCAGACC AACCTGCTGG CGCTTAACGC CGCCATCGAG GCGGCGCGGG CAGGGGAGTC GGGCCGGGGC TTCGCCGTGG TGGCCGACGA GGTGCGCCAG CTGTCGGCGC GCACCGCAGA TTCCACCAGT CAGATCGATG CCATCATCGC CAAGTTCCAG CAGAGTACGG CCAATGCGGC GAACACACTG ACCGCAGGTC AGCGCCAGGC AACTCAGGCG GTGCAGCTGG TGAAACAAGC TGAGGCCGTG TTTGCCGAGC TGGTGACCCG TATCGATAAG ATTAATCAGA TGACGGAGCT TAGCGCCGAT GCCATGCAGG AGCAGGGACT GGCGGCGGTG GATATCAGCG ATTCGCTGCA GGCGATCAGC GAGCTGGCCA GCGAAGGCTT TGCCCAGTCC CAGGCCGATA GACAGCTTGG CGAGCGCAGC TCACTCAAGT CGATGGAGTC ACGCCAGCTA GCGCGTCAGT TCTGGCGTCA GGCGGTGCAT CGCGCCAATG CTTAA
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Protein sequence | MRNNQPVIDN EVVLTDDDIL LSTTDLKGNI GYANEDFCRI CGFSEEELVR QPHNIVRHPD MPKAAFAILW QRLAQKQSWL GVVKNRCKDG SYYWVNAYVA PVMENGQVKE YQSVRRRASQ AQVERASDIY QSLNKSEQRS EIKDAKLGYG GKLTLFAVLC LLLAIGLSNI SPWLALICAP LLAIGMRLLL APLRALNDQA LTIVSDPVAR HIYAGRRDEL GNIQFAMEFT TAEIAGVVGR MTDASSVIAR DSDALLGSIT ATADRADGQN QQTAQAAAAV EELTASFNEL GQQLKQVSAD VEASQAAVLQ GYEQLDAVVA SIDELHNEVG NFAQVVSEIE HDSVAINQVL EVITKIAEQT NLLALNAAIE AARAGESGRG FAVVADEVRQ LSARTADSTS QIDAIIAKFQ QSTANAANTL TAGQRQATQA VQLVKQAEAV FAELVTRIDK INQMTELSAD AMQEQGLAAV DISDSLQAIS ELASEGFAQS QADRQLGERS SLKSMESRQL ARQFWRQAVH RANA
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