| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2527 |
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| Symbol | |
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| ID | 4921232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2980409 |
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| End bp | 2982508 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640164121 |
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| Product | outer membrane protein precursor MtrB |
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| Protein accession | YP_001094652 |
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| Protein GI | 127513455 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03509] decaheme-associated outer membrane protein, MtrB/PioB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCA AACTCAATGT AGTCACCCTC GCCCTTATCG CTAATGCCGG TATCGTCATT
CCCGGCATGG CGCTGGCCGA CGGCTATGGC ATTCAAAACG CCAACACAGA AAAGGTGAAG
TTCGATAACT GGGCCTGTAA GCGCTGTAAG ATTGAGACAG GCGTCACTGG CACTATCGGT
GCCGGCGTCG GTTACAACGA CAGCGACGAC ATCCGCTCGG CCAACGCCTT TGCCGCCGAA
AATGAATTTG TCGGCAAGGT CGACGCCGAT GTGAGCTACA TCAGCGAATC TGGCTACCGT
GCCAGTATAG AGGCGCAAAA CCTCGGCATG GAAAACGGCC GCCTGGATCT TGAGTCTGGC
AAGGTAGGTC AGCACAAGCT GAGCCTCAAC TACCGTCAGA TAGCCACCTA CAAGACTGAT
AAGGCTATGA GCCCTTATCA AGGCGTGGGC GGCGACCACC TGACCCTGCC AGACAACTGG
CAGACGGCGG GTTCGAGCCA GGATATGAGC GAGCTATACA GCAGCCTCAA CCCACTGGAG
CTGTCGCTCA AGCGCAAGCG CGCCGGCATC GGCTTCGAGT ATCAGGGTGA AGAGCTGTGG
AGCACCTACG TCAACTACCA GCGTGAAGAT AAGACCGGCC TTAAGCAGGC ATCGGGCAGC
TTCTTCAATC AGTCTATGAT GCTGGCAGAG CCTGTGGATT ACACCACAGA CACAGTTGAG
GCGGGTATCA AGCTTAAAGG CGACAACTGG TTTACCGCCC TGGCCTACTC AGGCTCGAGC
TTTAAGAACC AGTACAGCCA GCTCACCTTC GACAACGCCT TTAATCCGAC ATTCGGCGCC
CAGACTCAAG GCACTATGGC CTTAGACCCA GACAACGAGG CGCACACTGT CTCGCTGATG
GGCCAATACA CGGCGGGAAG CACCATCATG AGCGGCCGCG TGCATTATGG TCAGATGAGC
CAGGATCAGG CGCTGGTTAC CTCAGGTTAT GGGTACCAGA CACCTGTGGA CGCGCTGGAT
GCCAAGGTCG ACATGAAGGG CGCTAACCTC AAGGTGGTGT CTCGCATCAA CCGCACGGTT
CGCGTTAACG CCAGCTATGA CTATAGCGAC CGCGATAACA AGACCAATGT GGAAGAGTGG
ACCCAGATCA GCATCAACTC CACCACAGGC AAGGTGGCCT ACAACACCCC TTATGACTTC
ACGACACAAA GGGCTAAGTT GGGCGCCGAT TTCCGTCTGA GCCGTGGCAT GAAGCTGGAA
GCGGGTTACG ACTTCCGCCG CGACGAGCGT AGCTACCAGG ACCGCGAAAC CACAGATGAG
AACACGCTAT GGACCAAGTT CCACCTCAGC GCGTTCGACA ACTGGGATAT GTGGATCAAG
GGCAGCTATG GCGAGCGTGA TGGCTCTGAA TATCAGGCCT CGGAGTGGAC TTCGAGCGAG
TCTAACAGCC TGCTGCGTAA GTACAATCTG GCGGATCGTC AGCGCACCAT GGTTGAAGCC
CGTATCAGCC ACACGCCAAT CGAAGCCCTG ACCATAGACT TCGGTGGCCT TTATGCCTTA
GACGACTACA ACGAAACCCA GATAGGTCTG ACCGAGTCGA AAGATGTCAG CTACGACATT
AACGCCAGCT ACCTGATCAA CGACGACATG ATGGTCAACG CCTTCTACAA TCGTCAAAAC
ATAGACTCAG AGCAGGCAGG CAGCAGCAAC TACAGCACGC CTAACTGGTT TGGTCTGGTG
GAAGATCAGG TCGATGTGAT CGGCGCTGGG TTCAGCTACA ACAATCTGTT AGAGAAGAAA
CTGCGCCTGG GCGTGGACTA CACCTACTCA GATTCGAGCA GCAACACCCA GGTAAAACAG
GGTCTCAGCG GCAACTATGG TGATTACTAT GCCAAGGTCC ATAACGTCAA TGTCTACGGT
CAATACCAGG CCACAGACAA TATGGCACTG CGTCTTGACT ACAAGATGGA GAAATACAAG
GACAATGACC CAGGTAACAG CATAGCGCCA GACGGGATCT GGAACGTTGT CGGCTTTGGT
TACAACAGCC ATGACTACAA CGCTCACCTG ATCATGCTGA GCATGAGCTA CAAGCTGTAA
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| Protein sequence | MKFKLNVVTL ALIANAGIVI PGMALADGYG IQNANTEKVK FDNWACKRCK IETGVTGTIG
AGVGYNDSDD IRSANAFAAE NEFVGKVDAD VSYISESGYR ASIEAQNLGM ENGRLDLESG
KVGQHKLSLN YRQIATYKTD KAMSPYQGVG GDHLTLPDNW QTAGSSQDMS ELYSSLNPLE
LSLKRKRAGI GFEYQGEELW STYVNYQRED KTGLKQASGS FFNQSMMLAE PVDYTTDTVE
AGIKLKGDNW FTALAYSGSS FKNQYSQLTF DNAFNPTFGA QTQGTMALDP DNEAHTVSLM
GQYTAGSTIM SGRVHYGQMS QDQALVTSGY GYQTPVDALD AKVDMKGANL KVVSRINRTV
RVNASYDYSD RDNKTNVEEW TQISINSTTG KVAYNTPYDF TTQRAKLGAD FRLSRGMKLE
AGYDFRRDER SYQDRETTDE NTLWTKFHLS AFDNWDMWIK GSYGERDGSE YQASEWTSSE
SNSLLRKYNL ADRQRTMVEA RISHTPIEAL TIDFGGLYAL DDYNETQIGL TESKDVSYDI
NASYLINDDM MVNAFYNRQN IDSEQAGSSN YSTPNWFGLV EDQVDVIGAG FSYNNLLEKK
LRLGVDYTYS DSSSNTQVKQ GLSGNYGDYY AKVHNVNVYG QYQATDNMAL RLDYKMEKYK
DNDPGNSIAP DGIWNVVGFG YNSHDYNAHL IMLSMSYKL
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