| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2383 |
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| Symbol | |
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| ID | 4921447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2789272 |
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| End bp | 2789928 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640163973 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001094508 |
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| Protein GI | 127513311 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3226] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00360847 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGCAAC CTCTTAGTTA TGTTGGACGT ATCACCCACA GGGCCGATGG TGAGGCGCGG
CGCGTGGCTA TCTTAGAGGC GACTCTAAGG TTGATCGTCA AGGAGGGGGT TCGCGGCGTG
CGTCATCGCG CCGTGGCAAC AGAGGCGCAG GTACCGCTTG CCTCGACCAC CTATTACTTT
AAAGATATCA AAGATCTGAT CAGCGACGCC TTAACCTACT TTGCCGAAAA AACTCTGTGG
ATGAACAACA CTCTAGAGCA GAAGAGTTTT CAGCTGCTCG AGGTGCTTAA GGCAGACAGT
CACCAAGTGG CCCCGGACAA GGTGGCGGCG CATCTGACCG AATTTCTCTG TGAACATATT
CAAACCCAAG TGAGTCACAG GGACGATCGT ATTCTGGAGG TGGCGTTTCA CGAAGAGGCG
CTGCGCAATC CCGCGCTCGC CGAAGCGATT CAACTGTTGG ACAATGGCTT TGTCAGCACT
ATCGAGCAGT TTTTTACCGC CTTAGGATCA ACCACGGCCA ATGCCGATGC CCATCAGCTG
TTGGGGCTGA TTCGTTGGGT GGAGTATCAG AGCATTATCA GTGGCAATCT GGACAGCGAC
TTTTTGCAGC AGACCCTTGG CGCCTGTATC GACAAGATCC TGCGCGCCAT AAAATAA
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| Protein sequence | MQQPLSYVGR ITHRADGEAR RVAILEATLR LIVKEGVRGV RHRAVATEAQ VPLASTTYYF
KDIKDLISDA LTYFAEKTLW MNNTLEQKSF QLLEVLKADS HQVAPDKVAA HLTEFLCEHI
QTQVSHRDDR ILEVAFHEEA LRNPALAEAI QLLDNGFVST IEQFFTALGS TTANADAHQL
LGLIRWVEYQ SIISGNLDSD FLQQTLGACI DKILRAIK
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