| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2292 |
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| Symbol | |
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| ID | 4922285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2679244 |
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| End bp | 2680143 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640163877 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001094417 |
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| Protein GI | 127513220 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGACATCT ACGCCAACAT TCCCCTGTTT GTCTCAGTCG TCGAACTGGG CAGTTTCTCC
GAGGCCGCAA GGCGTTTAGG CATCAACAAG TCGGCGGTAA GTAAGCGCAT CAGCGCCTTA
GAGCAAGCCT TAGGGGTCAA GCTTATCCAG CGCACCACCC GCAGACTGCA CCTCACAGAT
GCCGGCAGGC AGTATTATGA ATATGTGCAC CAGGCGGCCG CCCTGATGCA GCAGGCCCAG
GATGCCCTGG CCAGCCAACA GGGGGCAGTT CAGGGCAGCT TAAAGGTGAG CCTGCCCAAC
GTCTTCGGTC AGCGTCATAT CGCGCCGCTG CTGAGCGAAT TTAGCCGCCA ATACCCCACC
ATCAACTTAG AGGTGAGCCT GGACGATCGC GTGGTGGATC TGCTTAAAGA GGGCCTGGAT
ATGGTGGTGC GAATAGGCGA TCTGCCAGAT TCCAGCCTGG TTGCGGTAAA GCTCGCCCCC
TGTCACAGCC TGCTGTGCGC CTCCCCCGAC TATCTTGCGC ACCAGAGCCA TCCCAGAAGC
CTTGCGGATC TCAGGGGACA CAACTGCCTC TTCTATTCGT ACTTTCGCGG TGGACTGGAG
TGGAGTTTTG AGCGGCGCGG CGAGGTGAGC CGAATCAAGC CCCGGGGCAA CATCAAAGTG
AATAACAGCG AGGTGATCCG CCGCCTGCTG CTCGATGGCA TGGGGATCGC CCTGATGCCC
AGGTATCTGG TGGAAGAGGA GTTGGCTGCG GGCACTCTGG TGCCAGTGCT CAGCGATTAC
CAGGCGCCGA CACATGGCAT CTACGCCCTC ACCCCGGAGC GGCAACATAT GCCCGCCCGG
CTCAGGGTGT TTATCGATTT TCTCAAGCAG GCGTTGGCGG AGCGCGGGGC GAACTGGTAA
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| Protein sequence | MDIYANIPLF VSVVELGSFS EAARRLGINK SAVSKRISAL EQALGVKLIQ RTTRRLHLTD
AGRQYYEYVH QAAALMQQAQ DALASQQGAV QGSLKVSLPN VFGQRHIAPL LSEFSRQYPT
INLEVSLDDR VVDLLKEGLD MVVRIGDLPD SSLVAVKLAP CHSLLCASPD YLAHQSHPRS
LADLRGHNCL FYSYFRGGLE WSFERRGEVS RIKPRGNIKV NNSEVIRRLL LDGMGIALMP
RYLVEEELAA GTLVPVLSDY QAPTHGIYAL TPERQHMPAR LRVFIDFLKQ ALAERGANW
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