Gene Shew_2237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2237 
Symbol 
ID4922873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2616285 
End bp2616653 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content54% 
IMG OID640163822 
Producthypothetical protein 
Protein accessionYP_001094362 
Protein GI127513165 
COG category[S] Function unknown 
COG ID[COG2832] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000431925 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000763101 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTATCA AGCGGGGCTT CTATCTACTC CTAGGCCTTA GCAGTCTGTT TCTCGGCCTG 
CTTGGCATTG CCCTTCCGCT ACTGCCGACC GTGCCTTTTA TCTTGCTGGC GGCCTTTTGT
TTTGCCCGCT CGAGTTCGCG CCTGCATGAC TGGCTGATGA CCCACCCTTG GTTTGCCGAT
GCGCTGCAGA ACTGGCATAG CGAGCGCGCC ATTCGCCGTG GCTTGAAGCG CAAGGCCTAT
ATCGCCACCT GTTTAAGTTT TAGCGTGAGT ATCATCTTGG TGCCGCTGCT TTGGGTGAAG
TTGATGCTAC TGGCCATGTT AACAGGCTTG CTGCTTTATC TCAGGCAAAT TCCCGAATTA
GACGACTGA
 
Protein sequence
MVIKRGFYLL LGLSSLFLGL LGIALPLLPT VPFILLAAFC FARSSSRLHD WLMTHPWFAD 
ALQNWHSERA IRRGLKRKAY IATCLSFSVS IILVPLLWVK LMLLAMLTGL LLYLRQIPEL
DD