Gene Shew_2222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2222 
Symbol 
ID4923218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2593467 
End bp2593817 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content47% 
IMG OID640163807 
Producthypothetical protein 
Protein accessionYP_001094347 
Protein GI127513150 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0163022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.071447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTACTG ATAAAGACGG ATACATACAT CTAATACAAT ATCTTACCGA GCATCTAGGC 
CTGTTTGAGG CCTCCGAAGC AGGTGGGGTA GCGGGTGACA CCGTCATGGA GTTGTTCGAA
GAGCAGTTGG CGGCGCAGAT CATCATGGTG TGTGGTCAAA ATCCTTCCTT AACCTTTGCC
GAACGCAACA TGGTGATTCG CGAAGTCGAC GCTATCGTCT ATGACTTAGA AGAGATCTTA
GCCAAGGTGG CTAACCACAA TGCCACCCAA GAGCAGACCC TGTTTATTAC CGAGTTTTCG
GGACTGATCA AAAATCTGTT TGATCAAGAA ATTGCCAAGA TGCAAGCTTA G
 
Protein sequence
MVTDKDGYIH LIQYLTEHLG LFEASEAGGV AGDTVMELFE EQLAAQIIMV CGQNPSLTFA 
ERNMVIREVD AIVYDLEEIL AKVANHNATQ EQTLFITEFS GLIKNLFDQE IAKMQA