| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2109 |
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| Symbol | |
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| ID | 4923593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2442406 |
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| End bp | 2444337 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163691 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_001094234 |
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| Protein GI | 127513037 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.235083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGAAA AGATCACGGC CATGTTGGGG TTAGTGGGGA TCTTGTCAAT CGTGTGTCAG
TGGCTTGGTT GGCGGCTGCG ACTGCCGGCG ATTCTCCCCT TGCTGCTCTG TGGTCTGTTG
GTGGGGCCGG TTTTTAATTT GCTGGATCCC GATGCCATTT TTGGCGATCT GCTATTTCCT
GTGATCTCAC TCGGGGTGGC GGTGATCCTG TTTGAGGGCG CGCTCACGCT CAATTTCTCC
GAGATCCGCG AACATGGCCG CATGGTGACC CATCTGGTGT CGCTCGGCAC CTTAGTCACC
TGGATCTGTA TCGGTGTAGC GACGCACTTC ATCATGGGGT TCTCTTGGGA GCTGGCCATG
TTGTTTGGCG CGCTGGTGGT GGTGACCGGC CCAACGGTGA TCGTGCCTAT GCTGCGCAGC
ATCAAACCCA AATCCCAATT GGCCAGTATT TTGCGCTGGG AAGGGATAGT GATCGACCCC
ATAGGCGCCT TGCTGGCCGT CTTAGTATTT GAATATCTAA CTGTGGCCGC GGAGCCCGCC
AGTCATGTGT TGCTGTCGCT GTTTTCCATG CTGGGTGTAG GCCTGGGGCT TGGCGTCCTG
TTTGGTTACG GCATAGGGGT GATGCTGCGC CGCGCCTGGG TGCCGCATTA TCTTAAGAAT
ACCGCTGTGC TCACCATCAT GCTGGGGGCA TTCGTGGCGT CTAACCTGCT GCAGGAAGAG
TCTGGCCTGC TTACCGTGAC CGTGATGGGG ATCTGGCTGG CGAACATGCG CGGCGTGGAT
ATTGGTGAGA TCATCGAATT TAAGGAGACG CTCACCGTAC TCTTCATCTC GGGCCTATTT
ATTCTGTTGG CGGCCAGGTT GGACTCTACC GCGCTAATGC AACTGGGATG GCAGGGACTG
GCGCTTTTGC TGGTGGTGAT GTTTATCGCC AGACCCTTAA GTGTCTGGTG CTGCGCCGTG
GGTACCTCGC TGCCTCGCGC CGATAAATGG TTTCTCAGCT GGGTGGCCCC GCGGGGGATA
GTCGCGGCGG CGGTGTCTTC GCTGTTTGCC ATCAAACTTG AGCGCCTCGA GGTGGCGGGT
GCCGACAAGA TAGTGCCGCT GGTGTTTTTG ATCATCATAG GTACAGTGGT GTCTCAGAGC
CTCACGGCCG GGGCCTGGGC TCGTTTCTTA GGGGTTAAGG CGGGTTCCGC TCAGGGGCTG
CTGATTTTTG GCGCCTCTAA GTTCGCCAGG GAGCTGGCTA AGGTACTACT CCAGAAGAAT
GTGTCTGTGG TCTTGGCAGA TAACAACTGG GATAATATAC GTCTATCGCG GATGGATAAT
ATTCCCGTGT ATTTTGGTAA CCCGGCCTCA GAGCATGCCG ATAACGCGCT GGATATGACG
GGATTGGGCC GCCTACTGGT CTTGTCTCCC TATCGTCAGC TCAATCCGCT GGTGACTTTT
CATTTTCAAG ATATTCTCGG CAAGAATAAG GTGTTTGGCC TGGGAAGCGG TGAGGGTAAC
AGCGCCCGCC ATCAGTTGTC CGAGTCCTAT TTGGAGCGTC TATGCCTGTT TGGTGACAAT
GTTACTTATG CAAGGCTCGC CAGCACCATC GCCAAGGGTG GTAAGATCAA GAGTACCAGC
CTGACGGAGA ACTTTAGCTT CGCCGATTTT AAGCAGCGTT ACGGTGAAGG CGCCTTGCCG
CTCATCTATC TGCAAGAGGG TAAGGTGAAG CTTATCATCC AGGCGGTGGA TGACTTACCT
GTGGGCATAG AGCTTATCAG CTTGTTATCC GAGGAGGCGC TCAATGAGGC GTTGCTGGCC
GATGAGAAGA AGGCGGCAGC GTCCCTTGAA GACGGTGAAT GTGTGCCTTC TACGTCAGTT
GATGGGAGTC AGGAGAGTAA AGGCAGTCAG GTGCCATCAG CTGTGACGGC AGACGAGAAA
GCGGCAGGTT AA
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| Protein sequence | MVEKITAMLG LVGILSIVCQ WLGWRLRLPA ILPLLLCGLL VGPVFNLLDP DAIFGDLLFP
VISLGVAVIL FEGALTLNFS EIREHGRMVT HLVSLGTLVT WICIGVATHF IMGFSWELAM
LFGALVVVTG PTVIVPMLRS IKPKSQLASI LRWEGIVIDP IGALLAVLVF EYLTVAAEPA
SHVLLSLFSM LGVGLGLGVL FGYGIGVMLR RAWVPHYLKN TAVLTIMLGA FVASNLLQEE
SGLLTVTVMG IWLANMRGVD IGEIIEFKET LTVLFISGLF ILLAARLDST ALMQLGWQGL
ALLLVVMFIA RPLSVWCCAV GTSLPRADKW FLSWVAPRGI VAAAVSSLFA IKLERLEVAG
ADKIVPLVFL IIIGTVVSQS LTAGAWARFL GVKAGSAQGL LIFGASKFAR ELAKVLLQKN
VSVVLADNNW DNIRLSRMDN IPVYFGNPAS EHADNALDMT GLGRLLVLSP YRQLNPLVTF
HFQDILGKNK VFGLGSGEGN SARHQLSESY LERLCLFGDN VTYARLASTI AKGGKIKSTS
LTENFSFADF KQRYGEGALP LIYLQEGKVK LIIQAVDDLP VGIELISLLS EEALNEALLA
DEKKAAASLE DGECVPSTSV DGSQESKGSQ VPSAVTADEK AAG
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