| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2026 |
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| Symbol | |
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| ID | 4923865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2340047 |
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| End bp | 2341162 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640163599 |
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| Product | alanine dehydrogenase |
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| Protein accession | YP_001094151 |
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| Protein GI | 127512954 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0686] Alanine dehydrogenase |
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| TIGRFAM ID | [TIGR00518] alanine dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000138522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000166199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGATAATTG GTGTACCTAA AGAAATCAAA AACCACGAAT ATCGTGTTGG TATGGTGCCG
TCAAGTGTCC GCGAATTGAC CCTAAAAGGT CATGAAGTAT TTGTAGAGAA GAATGCAGGT
GTTGGGATCG GTTTTAGCGA CCAAGACTAT GTCGATGTAG GCGCATCAAT CTTAGACACT
GCAGCTGAAG TTTTTGCGAA AGCAGAAATG ATCGTTAAGG TAAAAGAACC TCAAGCGGTC
GAGCGTGCCA TGTTGCGTGA AGATCAGTTG CTGTTCACTT ATCTTCATCT TGCTCCCGAT
CTGCCACAAA CTGAAGATCT TATTAAGAGC GGTGCCGTCT GTATCGCTTA TGAAACAGTA
ACCGATGCCC GTGGCGGCCT TCCGCTACTG GCGCCAATGT CTGAAGTTGC CGGTCGTATG
TCTATCCAGG CTGGTGCCAT GGCACTGGAA AAATCAATGG GTGGCCGCGG CATGCTACTT
GGCGGCGTAC CTGGTGTTGA GCCCGCTAAA GTCGTTATCA TCGGCGGCGG CATGGTTGGT
ACCAACGCAG CACAGATGGC CGTTGGCCTG GGCGCGGACG TGGTTATCCT AGATCGCAGC
ATCGATGCGC TGCGTCGTCT GAACGCTCAG TTCGATAACC GTGTTAAGGC AATCTACTCG
ACTGCCGACG CTATCGAAAA GCACGTACTG GAAGCCGACC TAGTGATTGG TGGCGTACTG
GTTCCTGGTG CAGCAGCACC TAAACTAGTG ACCAAAGATC ACATCAAGCG AATGAAGCCA
GGCAGCGCTA TCGTTGACGT CGCTATCGAC CAAGGCGGTT GTGTTGAGAC TTCTCATGCT
ACGACTCACC AAGACCCAAC TTATATCGTT GATGAAGTAG TACATTACTG TGTGGCTAAC
ATGCCAGGTG CTGTGGCTCG TACCTCGACC TTCGCGCTGA ACAACGCGAC CCTGCCTTAC
ATCATCAAGT TGGCCGACAT GGGTTACCGC GAAGCACTGC GTCAAGACAA GCACCTGCTA
AACGGCTTGA ACGTAATGCA TGGTAAGGTA ACCTGTAAAG AAGTTGCTGA AGCCCTGAAC
TTCGAGTTTG TTGATCCAAG CGTACTACTC GCCTAA
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| Protein sequence | MIIGVPKEIK NHEYRVGMVP SSVRELTLKG HEVFVEKNAG VGIGFSDQDY VDVGASILDT
AAEVFAKAEM IVKVKEPQAV ERAMLREDQL LFTYLHLAPD LPQTEDLIKS GAVCIAYETV
TDARGGLPLL APMSEVAGRM SIQAGAMALE KSMGGRGMLL GGVPGVEPAK VVIIGGGMVG
TNAAQMAVGL GADVVILDRS IDALRRLNAQ FDNRVKAIYS TADAIEKHVL EADLVIGGVL
VPGAAAPKLV TKDHIKRMKP GSAIVDVAID QGGCVETSHA TTHQDPTYIV DEVVHYCVAN
MPGAVARTST FALNNATLPY IIKLADMGYR EALRQDKHLL NGLNVMHGKV TCKEVAEALN
FEFVDPSVLL A
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