| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1980 |
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| Symbol | |
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| ID | 4921008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2290386 |
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| End bp | 2291042 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640163549 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094105 |
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| Protein GI | 127512908 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0716] Flavodoxins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.838314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTCGTT GGATATTGAT TGGTTTACTG ATCGCGCTGG CATTAGTAAC ACTAATAGCC
TTGGTCGTGA CGCGGATTGA AAACGCCCAG TACACGAAAA ATAGATCGCA TCTGTCCAGC
ACACCGACCG GTCGAGCGGC CAAGGTCAAT ACGGTTATTG TGGTGTTCTC CCGCTCTGGC
AATACTGGCG TCCTGGCGGA CCATATTGCG CTGCAAACCG CGGGTCATGT GTATGAGATC
TCGGCCGAGA GTTACCAACT TGGGATCTCG GGCTGGATTA ACGCGCTGAA AGACGCAAGA
AGCAATGTCG CCGACATTAC ACCATCGCAT ATTGATCTCG AGCCTTATGA CACTGTCTTT
TTAGGTTCGC CTATCTGGCT CTATAGTCCG GCACCACCGA TATGGCAGTT TGTCAAAGAC
AATGATTTTA CGGGCAAAAA CGTCGTGCTC TTTAATACCT TCAACAGCAA ATTTAAGCAG
CAATACATTG ATGATTTTGC TAAATTGGTT TTTGCTAAAG GCGCCAAATC ATTTAAGCAC
AGGTACGTAA AACGAGGACG TATGGGCGAC CAAATTTCAC AGCAGCAGAT GCTGAAAGAA
TTTGACGCGC AATCAACCGA GGTCAAGCAA GTAGGGCATG TCTATGTTAA TCACTAG
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| Protein sequence | MGRWILIGLL IALALVTLIA LVVTRIENAQ YTKNRSHLSS TPTGRAAKVN TVIVVFSRSG
NTGVLADHIA LQTAGHVYEI SAESYQLGIS GWINALKDAR SNVADITPSH IDLEPYDTVF
LGSPIWLYSP APPIWQFVKD NDFTGKNVVL FNTFNSKFKQ QYIDDFAKLV FAKGAKSFKH
RYVKRGRMGD QISQQQMLKE FDAQSTEVKQ VGHVYVNH
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