| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1966 |
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| Symbol | |
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| ID | 4921398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2271340 |
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| End bp | 2272089 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640163535 |
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| Product | DTW domain-containing protein |
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| Protein accession | YP_001094091 |
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| Protein GI | 127512894 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3148] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0150191 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTTC CTCCCCATGC TGTACATCAG CGCTACCAAT ATCGAAAGGC GATCTCTACC
CGGCCCTATA ATGCCCGGGG GAAAAACCTT GAGCGCTGTG AGGCCTGCCT GCTGGCTCAG
CGCTACTGCA CCTGCGATAC CCGCGCGCAG TTGCAATCCG AGGTTAGTTT TTTGCTGGTG
ATGTATGACG ATGAGGTGTT AAAACCCAGT AATTCCGGGC GCTTAATTGC CGATCTTATC
CCCGATACCC ATGCCTATAT CTGGGATCGT ACCCGAACTA ATCGCAAGCT CATGGCACTA
CTCGAATCTT CCGAATATCA ACCTTATCTG GTTTTCCCCA GCGAATATGC CATGCCATCT
CAAGCAGTGG TGCCCGATGT AGCGCTGAAA ACGCGCTTAG CCTCGGAAAC CAAACGCCCG
CTGTTTGTGC TGCTCGATGG CAGCTGGCGT GAGGCGATCA AGATGTTTAA CAAGAGTGAA
TATCTGCACC ATCTGCCCAT GCTGTCGTTT GCACCGGACG CCGCGGCGCG ATATGGCCTA
CGTAAGGGAA GTCGTGATTT TCAGCTCGGT ACCGCCGAGG TGGCGAGTTT AGTACTTAGC
GCTGCCGCAG AGCCCAAGAA TGCAGCCAGT CTGTCGGCCT GGTTCTCGCT GTTTATCGAA
TCATCCCTCT ATAGCCGCAG CCGCAAGAGC CCTAAAGATC TGGCGCCACT CGACAGTTTG
AAAGCCGCTT TCCTAAAGAC TTTAAAGTAA
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| Protein sequence | MTLPPHAVHQ RYQYRKAIST RPYNARGKNL ERCEACLLAQ RYCTCDTRAQ LQSEVSFLLV
MYDDEVLKPS NSGRLIADLI PDTHAYIWDR TRTNRKLMAL LESSEYQPYL VFPSEYAMPS
QAVVPDVALK TRLASETKRP LFVLLDGSWR EAIKMFNKSE YLHHLPMLSF APDAAARYGL
RKGSRDFQLG TAEVASLVLS AAAEPKNAAS LSAWFSLFIE SSLYSRSRKS PKDLAPLDSL
KAAFLKTLK
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