| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1936 |
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| Symbol | |
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| ID | 4921470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2237070 |
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| End bp | 2237750 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640163505 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001094061 |
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| Protein GI | 127512864 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0482001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0104585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAGAG TGTTACTCGT TGATGATGAT CCCTTTGCGC GCGAAGTCCT CTATCTTGGC
CTAGTCGCCA GCGGGTATCA GGTGCATTGT GCCAGTAATG GCCAGGAAGC ACTGCTTATT
TTAGGCAAAA TGGCGATCGA TCTCATTATC TTGGATATCG AGATGCCCCT TGTGGATGGT
TTTGCGTTTC TAGAGGCGCG TAGCGACAAC TTGCCGGTGA TCCTGATCTC GGCTACCGAT
GAAGAGGAGC GGCGGGTAAA AGGGTTTCGT CTCGGCGCCG ACGATTTTCT CTCAAAACCT
GTAAGTGTGC GAGAGCTGGT GGCGCGTATC GATGCCCTGC GTCGCCGCGC AGCTATCACC
AAGGCGCAGC TGACCGAGGT TCTGCCGCCG CCAATCAAGG CGATCTATTT TAACCAAAAT
GATTTCAGCA TAGAGGTGGC TGAGCGGCGC GTCGCCCTGA CCCAGACCGA GTTTAAGCTA
CTTAAATACC TGTTTGATCG CAAAGGAGAG GTGATCACCA AACAGGAGCT GCAGAAAAGT
GTGTTGAAGA AAGATCTGGG ACAGTTTGAT CGAAACCTGG ATATGCACAT CAGTAATACC
CGGCGTAAGC TTGCCAAGAT CTGCCTGCCG AAAACCATCA TCAACACTGT CCGTGGCCAG
GGATACAGCT TTCTGTGTTA G
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| Protein sequence | MERVLLVDDD PFAREVLYLG LVASGYQVHC ASNGQEALLI LGKMAIDLII LDIEMPLVDG
FAFLEARSDN LPVILISATD EEERRVKGFR LGADDFLSKP VSVRELVARI DALRRRAAIT
KAQLTEVLPP PIKAIYFNQN DFSIEVAERR VALTQTEFKL LKYLFDRKGE VITKQELQKS
VLKKDLGQFD RNLDMHISNT RRKLAKICLP KTIINTVRGQ GYSFLC
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