| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1907 |
|---|
| Symbol | |
|---|
| ID | 4921629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 2203874 |
|---|
| End bp | 2204302 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640163475 |
|---|
| Product | glutathione-dependent formaldehyde-activating, GFA |
|---|
| Protein accession | YP_001094032 |
|---|
| Protein GI | 127512835 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3791] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.39902 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000265119 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGTA AATGTCTGTG TGGAGATGTC GAATTTTACA TAAGCGGATC TCTTCCTCAT
TTCTATCAGT GTCATTGTTC TTTATGTCGA AAATTGTCTG CGTCCTCGTC AGATACCGCC
ACATTTCTTA ATAAAGCGCA ATTTACATGG ATTAAGGGGG AGTCCCTTGT TAATTCATAC
ATCACTGAAA CCGGTTATCG TTCTGATTTC TGTAGCAAGT GTGGCAGTAC AGTCCCTCAC
CTGATGAGTA ATAAAAAGCA GTATTGGATC CCAGCCGGAT TACTCGATGA TGCTAAAGAT
AGCCGTGTCG TGGCGCATCT GTTTGTTGAG TCTAAAGCCC ATTGGGACAT TATTGGCGAC
AGCGGTGCAC AATTTGAAGA GATGCCTGAT ATGGAAACCC TTAATAACGC ATTGCAAAGA
TCTAATTGA
|
|---|
| Protein sequence | MKGKCLCGDV EFYISGSLPH FYQCHCSLCR KLSASSSDTA TFLNKAQFTW IKGESLVNSY
ITETGYRSDF CSKCGSTVPH LMSNKKQYWI PAGLLDDAKD SRVVAHLFVE SKAHWDIIGD
SGAQFEEMPD METLNNALQR SN
|
|---|
| |