| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1894 |
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| Symbol | |
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| ID | 4921774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2187732 |
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| End bp | 2189663 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640163462 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094019 |
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| Protein GI | 127512822 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.278256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGC GAGAGAACGA AAAACCAGTA CAGGTTAAAA AACCGGTAAG GATAAGTGGA
GAAGCGTCAA GCACGGCTAA GGTGCTTCCG ACCTATTACT ACCTCAGCAA TTTTCTGCTA
ATGCTTGAGG GCGTCGCCCG CCGCTATGGC GATCTCCTCG ATGAGGTCGA GCTCGGCTTC
GTCGATACCT TCTCAGCCTT GACCCCTGAT GCCCAGTGCC TGCTTGTCAG GCTGATCTCA
CGCCAGGGCC CCTGGTTCTG TGAGGCTCAG CTAAATTACA GTGAGATCGA AGGGATCCCA
GAGGCTATCT CCGAGCTTTT TAAGCACAGT CTTATCTGCT ATGAGCAGCC CGATACGGCC
TGGCTGCTGC AAAAGAGCAC TAAGACGGAG CTAAGCCAGG CCTTGGTTGA GACAAGCCAA
GCCTTGGTTA AGGATATCAA GCGGTTAAAG AAGAGTGAGC TTATCCAGTA TGCCCAAGAG
ACAGGCTTGT TACCAAATCT GCTGAGGCGT TTGGCACCAG CACAGCATTG GTTCTGCCTT
AGCCCTCAGG TCGTCTATCG CCGCTTCGAA TTACTCTATT TCGAGCGCAT GAGTCAGTCC
TTGAGTCAGT TTATCTTGGC CGATCTTGGT ATTCATAATT TTGAAGCGTA CTCGACCAGC
ATCGCCAGTC GCAGCTTCAA TACGCGAGCC GAGATAGAAG GCTTGTATAC GTTGTCTAGC
CTATACCAAG AGTTTGAAGA GGGTGGTCTG AGCGGCAAGC CCAGTGATAT TGGTATCGAA
AATTTTGATT CATTTTGTCA AAGGCTCACC GAACTGCCCG ATTTCACCAA AGAGGCTGGC
AATGAAAAGC TGAACCGCAT GACCCAAGGG CTCTGGCTAA TGGCGGCGCG CCAATTAGAG
CGTTTGGGTC ACTTTGAGCG CGCCTTAGCC CTGTATGGAA ACACAAAGAA ACCGCCTAGC
CGGGAGCGCC AGGCTCGCTG CCTGAATAAG CTTGGCCGTG ATGATGAGGC GTTAGAATTT
GTAGAGCTGA TGTTAGCGTC TCCTATGGAG GAGAGTGAGC GTCTGGTCGC CAGGCGTTTG
CAGAAAAGCC TTCATCGCAG CCTGGGACGG GCGGCGCCCA AGCCTTGGCA AGGGGAGTTT
GATACCTTCA AACTAGAATG TCAGCGCACA GCAAATGATG AGAACTTAGA AGGCAGAGAG
TCAAACGCCG AGGGTGCTGG ACGCGTTGAG CAATGCGCCG CCAGACACTT GAGCACTATG
CAGGGTGAGC AGTTGCGGCT TTGTGTCGAG GTGGAGAACC GTCTCTTCTG TAGCCTGTTT
GGCCTGGCCT TCTGGGACAT TATCTTCACC GATGTTGGCG GCGCCTTCGC TAATTCCTAT
CAGAGCAGGC CGAGCGACAT GTACCAGAGT GAGTTCTACC CAAGGCGCAA ACAAGCGATA
GATAAGAGAC TCGCGGCATT GGCCTCGGGT GACACCCAGA TGATCATGGA ACATTTTCAT
CAAAAATGCG GCATCACCAA CGACTGGGTG CATTGGCCAT TGTTTGAGGA GTTAAGCTTT
GATGCCTTAG GGTTGGAATC AGCCCAAAGC CGAGACAAGG ATCAGACCCC CCTGTTACTG
CAGCTGGCGC TGACAGCATT CAGCGGGGCC TTTTTAGCGA ATCTGTTTCG TCAGATGCTG
TTCGATCTGC GTTATTACCG CGCGGGCTTT CCCGATCTTA TCTGTTTTCA TCTAACTGCC
GAATATCTTG CAATCGAACG TCACGCAACC GATGACGGGG CGCCAAACTT AATTGATAGC
AGAGTCACAG CCGAGCTTAT CGAGGTGAAG GGCCCGGGAG ATGCCCTAAG AGATAATCAG
ACAGTCTGGC TGGATTGGTT TAATCGAAAC GGCGTTAAGG CCAGCGTCTG CTATCTCTCT
TGGCTCGACT AA
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| Protein sequence | MTQRENEKPV QVKKPVRISG EASSTAKVLP TYYYLSNFLL MLEGVARRYG DLLDEVELGF
VDTFSALTPD AQCLLVRLIS RQGPWFCEAQ LNYSEIEGIP EAISELFKHS LICYEQPDTA
WLLQKSTKTE LSQALVETSQ ALVKDIKRLK KSELIQYAQE TGLLPNLLRR LAPAQHWFCL
SPQVVYRRFE LLYFERMSQS LSQFILADLG IHNFEAYSTS IASRSFNTRA EIEGLYTLSS
LYQEFEEGGL SGKPSDIGIE NFDSFCQRLT ELPDFTKEAG NEKLNRMTQG LWLMAARQLE
RLGHFERALA LYGNTKKPPS RERQARCLNK LGRDDEALEF VELMLASPME ESERLVARRL
QKSLHRSLGR AAPKPWQGEF DTFKLECQRT ANDENLEGRE SNAEGAGRVE QCAARHLSTM
QGEQLRLCVE VENRLFCSLF GLAFWDIIFT DVGGAFANSY QSRPSDMYQS EFYPRRKQAI
DKRLAALASG DTQMIMEHFH QKCGITNDWV HWPLFEELSF DALGLESAQS RDKDQTPLLL
QLALTAFSGA FLANLFRQML FDLRYYRAGF PDLICFHLTA EYLAIERHAT DDGAPNLIDS
RVTAELIEVK GPGDALRDNQ TVWLDWFNRN GVKASVCYLS WLD
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