| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1774 |
|---|
| Symbol | |
|---|
| ID | 4923042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 2029126 |
|---|
| End bp | 2029623 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640163335 |
|---|
| Product | excinuclease ATPase subunit |
|---|
| Protein accession | YP_001093899 |
|---|
| Protein GI | 127512702 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAA AGATACTGCT TGTAGGTTTG ACCTCTCTGA CCCTATGTTC TCCGCTGGCC
TTTGCCAGAG ATGATGTCGG CAACTATAAC ATCGCCTCGG TGCTTAATTC AGAGGCGGCC
AAGGCCAAGC TGGGCAGTGA TGTCAGCTTC TATTTTGGCG AGCAGGCCTA TGGTGAGCCT
GTGCAGAAAC TGGGTGAGCT GAAGACCAAC AAGAAGACCA ATGCGTTTAA TAAGTCGGAT
CAGGAAGCCT GCGAATGGGT CTTCCTGTCG GCGATGATTG CCCTTAAAAA TAGCGCATTG
AAACAAGGCG GTAACGCCAT AGTGAATATC AAGTCTAACT ATAAGAACAA CCTGACCTCG
AGCGAAGAGA CCTTCCAGTG CGGCGCCGGC GCCCTGATGG CGGGTGTTGC GCTGACCGGT
GAGGTGGTTA AGCTGGCCGA GGGTGCTAGT TCTGAAACGG CTAATCCCGA GAATGTTAGT
CCCGAAAGCG TTAAATAA
|
|---|
| Protein sequence | MMKKILLVGL TSLTLCSPLA FARDDVGNYN IASVLNSEAA KAKLGSDVSF YFGEQAYGEP
VQKLGELKTN KKTNAFNKSD QEACEWVFLS AMIALKNSAL KQGGNAIVNI KSNYKNNLTS
SEETFQCGAG ALMAGVALTG EVVKLAEGAS SETANPENVS PESVK
|
|---|
| |