Gene Shew_1725 details

Gene Information

• Locus tag: Shew_1725
• ID: 4923234
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella loihica PV-4
• Kingdom: Bacteria
• Replicon accession: NC_009092
• Strand: +
• Start bp: 1979156
• End bp: 1979707
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640163287
• Product: curlin-associated protein
• Protein accession: YP_001093851
• Protein GI: 127512654

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0532195
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAAACAA ATTTGATGCA AGCAGTCTTT AAGGCCGGGC ATTTTGCCTG GCGTCAGGCA 
ATCAGCCGAT TGTTCTTGTT AGCGATGCTT TTTGCTGGCT TGCCTGTGTG GGCCGATGAC 
CTCAGTAGTC TTGATGAGTT GGCCCAGGGG GATAATGCTA GCATCATGCA GCTTGGGGAT 
GCGCTGCAGG CCGACATCAC CCAAAGCGGC GAGGCGAATC GCGCCTTGTT TACGCAATTT 
GGGGTGGCCA ACAGCGCTGA GTTGCAGCAG CAGGGGATCG GCAATCAGGC GTATCTGCTG 
CAGCAAGGGG AGGCGATAGA GGCCAGCCTG CTGCAGGTTG GGGTCAACAA CAGTCTGATC 
GCCAGTCAAC TTGGAGCGAA CCTGTCTCTG GTAGCTGAGC AGCGGGGCAG TGATAACCAG 
GCCTATGTGC AACAGAGCGG TTATGACAAT GAGGTCAGCA TCTATCAAAA CGGTTCGGGT 
CATGGGGTGA TTGTGACTCA ATGGGGGAAT GCACAGCGAG CAAGCGTGAC TCAGGGTTAT 
CGTCAGCAGT AA 

 

Protein sequence

METNLMQAVF KAGHFAWRQA ISRLFLLAML FAGLPVWADD LSSLDELAQG DNASIMQLGD 
ALQADITQSG EANRALFTQF GVANSAELQQ QGIGNQAYLL QQGEAIEASL LQVGVNNSLI 
ASQLGANLSL VAEQRGSDNQ AYVQQSGYDN EVSIYQNGSG HGVIVTQWGN AQRASVTQGY 
RQQ