| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1659 |
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| Symbol | |
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| ID | 4921954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1908540 |
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| End bp | 1910213 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163221 |
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| Product | ferredoxin-dependent glutamate synthase |
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| Protein accession | YP_001093785 |
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| Protein GI | 127512588 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.001393 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.49498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATCA TGCAAAAGGT CTTTTGGCTT ATCGCCACCC TAGGTAACGG GGCCGGACTC
TATTTATATC TCACCTTTGG CGGCACTGGC GCCGCCTTGG TCCTCGGCTT TACACTGCTC
TACACCTTGG TCGGCGCCTA CGATCTGCTC TTTAGCTCCC ACACTCTTAA CCGCCTCTAC
CCTGTGGTCG CCTACCTGCG CTACTTCCTC GAGTCTTACC GGGTAGAGAT ACAGCAGTAC
TTTATCGCCA GCGACACAGA GGAAGCCCCC TTTAACCGCG AGCAGCGCTC CTTGGTCTAT
CAAAGGGCCA AGAACGTGCG CGATACCATA GCCTTCGGCA CCCAGCGCGA TCTGTTGGAG
GAGAACTATC TGAGCCTGTG GCACTCGCTG TCGCCGAAAC ATATCGACGA GCAGGCCAAG
CGGGTGCGCA TCGGCGGACC AGATTGCACT CAGCCCTATG ATGCATCCTA CTTTAATATC
TCGGCCATGA GTTTCGGCTC CCTCAGCGCC AATGCCATCG AGGCACTCAA TCTGGGCGCC
AAGAAGGCGG GTTGCTATCA CAACACGGGG GAAGGCGGCG CCAGTCCCTA TCACCTCAAG
CATGGCGGCG ATCTGGTATG GCAGATAGGC TCCGGCCTGT TTGGCTGCCG CGACGATGAG
GGTAACTTTA ACCCCGACAG CTTCGAGAAG ATGGCCAAAC GCCCGCAGAT CAAGATGATA
GAGATAAAAC TCAGCCAGGG AGCTAAGCCG GGGCACGGCG GCGTGCTGCC CAAGGCCAAG
ATCACCCCAG AGATCGCCCT CATCCGCCAT ATCCCTATGG ATAAAGATTG TGTCTCTCCC
GCGGTCAACC CTGAGTGCAC CACGCCTATC GCCCTGCTCA ACTTCGTCAA ACGCTTGCGG
GAGTTGAGTG GTGGCAAACC GGTGGGCTTT AAGCTCTGTA TAGGTAATCC GGCGGAGTTT
CTTGCCATCT GCAAGGCGAT GCTCAAGACA GGCATCACAC CCGACTTTAT CACCATAGAT
GGCGCCGAAG GCGGCACGGG GGCGGCGCCG GTCGAGTTCA GTAACCGTCT GGGGATGATG
TGTCTCGAAG GGGTTTACTT TGCCAACAAC GCCCTGGTTG GCGTGGGCCT GAGGCACAAG
ATCACCCTGA TCGCCTCGGG CAAGACGGCC TCCAGCTTCG ACCTGCTGAC CAAAATCGCC
ATGGGCGCCG ACTTAGTCAA CGCCGCCCGC ACCATGATGC TGTCACTAGG CTGCATTCAG
TCCAGAAGCT GTAACACCAA CATGTGTCCC ACAGGCATCG CCACCCAAGA CCCCGCCCGC
TCCAAGGCGC TGGATGTACA GGTGAAGAGC GAACGGGTGA AGAACTTCCA TCACAACACC
CTAAAAGCCT TCTATGAACT GGTGGGCAGC ATGGGACTGG ATAACCCCAA CAAGTTAAAG
CCGCGAATGA TCAAGCGCCG CTCCCCCTAT GGCCTGCTGA TCTCCACCGG CAGCCTGGTG
GCCCCTCTCA CCCACAACGC CATCATAGAA GAGAAGCTGC AAGGCACCGC CTGGGCATCC
TGGTGGCAGC AATGCACCGC CGAAGACTTC TACTGCGAAG ATACCTATAT CCTGACCCCC
GCCGAGTTTG GTCTCTCCCG TCATAGGGAA AATGGCCACA GGAAAAATGC TTAA
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| Protein sequence | MTIMQKVFWL IATLGNGAGL YLYLTFGGTG AALVLGFTLL YTLVGAYDLL FSSHTLNRLY
PVVAYLRYFL ESYRVEIQQY FIASDTEEAP FNREQRSLVY QRAKNVRDTI AFGTQRDLLE
ENYLSLWHSL SPKHIDEQAK RVRIGGPDCT QPYDASYFNI SAMSFGSLSA NAIEALNLGA
KKAGCYHNTG EGGASPYHLK HGGDLVWQIG SGLFGCRDDE GNFNPDSFEK MAKRPQIKMI
EIKLSQGAKP GHGGVLPKAK ITPEIALIRH IPMDKDCVSP AVNPECTTPI ALLNFVKRLR
ELSGGKPVGF KLCIGNPAEF LAICKAMLKT GITPDFITID GAEGGTGAAP VEFSNRLGMM
CLEGVYFANN ALVGVGLRHK ITLIASGKTA SSFDLLTKIA MGADLVNAAR TMMLSLGCIQ
SRSCNTNMCP TGIATQDPAR SKALDVQVKS ERVKNFHHNT LKAFYELVGS MGLDNPNKLK
PRMIKRRSPY GLLISTGSLV APLTHNAIIE EKLQGTAWAS WWQQCTAEDF YCEDTYILTP
AEFGLSRHRE NGHRKNA
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